KEGG   Leishmania infantum: LINJ_29_2610
Entry
LINJ_29_2610      CDS       T01112                                 
Symbol
VPS4
Name
(RefSeq) vacuolar protein sorting-associated protein 4
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
lif  Leishmania infantum
Pathway
lif03250  Viral life cycle - HIV-1
lif04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    LINJ_29_2610 (VPS4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    LINJ_29_2610 (VPS4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lif04131]
    LINJ_29_2610 (VPS4)
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_29_2610 (VPS4)
Membrane trafficking [BR:lif04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    LINJ_29_2610 (VPS4)
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    LINJ_29_2610 (VPS4)
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 AAA_5 AAA_22 AAA_14 USP8_dimer RuvB_N TIP49 DUF815 AAA_24 AAA_2 AAA_33 AAA_17 AAA_25 AAA_18 RNA_helicase IstB_IS21 Viral_helicase1 Parvo_NS1 AAA_28 PPV_E1_C Mg_chelatase AAA_7 NACHT bpMoxR PhoH nSTAND3 AFG1_ATPase
Other DBs
NCBI-GeneID: 5070823
NCBI-ProteinID: XP_001466783
UniProt: A4I4W4
Position
29:1090553..1091890
AA seq 445 aa
MSVDFTAKAVELFKKAATLDENKEYEQAYRWYMETIDVFLTAIKYENKNPTKREYMRSKV
SDIIARAEKIKEFLDRSKDGDGATQGGSGATAQKTASASKKAKEDDEDKQRMRSSLGSAI
VKVKPNVHWDQIAGLEAAKQALKESVILPMKFPQLFTGKRKPWRGILLYGPPGTGKSYLA
KAVATEADGTFLSVSSSDLLSRWLGDSEKLVRSLFEMAREAYKTGGKPSIIFVDEIDSLV
SARSDSENDASRRVKTEFLVQMQGVGYDDEGVLVLAATNIPWSLDSAIRRRFERRIYIPL
PEFQARVQMFKIHLGDTPNTLVDEDWLELGRRTEMYSGSDIENVVRNALMECIRTLQVAT
HFKRVVGPDPHDPTRMVKNRLLPCSPGDPDAFPMSAVEITEPELLMPMPVTKEDFIKALR
TSKPSVNDEDIERHVKFTADFGQEG
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtccgtcgacttcacggctaaggccgtcgagctcttcaagaaggccgcaacgctggat
gagaacaaggaatacgagcaggcgtaccggtggtacatggagacgatcgacgtgttcctg
acggccatcaagtacgagaacaagaaccccacgaagcgggagtacatgcgaagcaaggtg
tctgacatcattgcccgtgccgagaagatcaaggaatttctcgaccgctccaaggacgga
gacggtgccacccagggcggctccggcgcaactgcgcagaagacggcgtctgccagcaag
aaagccaaggaggatgacgaggacaagcagcgcatgcgcagcagcctcggtagcgccatc
gtcaaggtgaagcccaacgtgcactgggaccagatagccggcctcgaggcagccaagcag
gccctgaaggagtctgtcatcttgccaatgaagttcccgcagctctttaccggcaaacgc
aaaccgtggcgcggtatcctgctctacggccccccgggcacgggtaagtcctaccttgcc
aaggcggtagccaccgaggcggacggcacctttctcagcgtcagtagctccgatctgctc
tcccgctggctcggtgactcggagaagctcgtgcgcagtctcttcgagatggcccgcgag
gcctacaagacaggcgggaagccgtctatcatctttgtggatgagatcgactctctcgtc
tccgcgcgctccgacagcgagaacgacgcctcgcggcgtgtcaaaacggagttccttgtg
cagatgcagggtgtgggttacgacgacgaaggcgtgctcgtgctagctgccaccaacatt
ccgtggtcgctcgatagcgctatccggcggcggtttgagcgccgtatttacattccgctg
ccggagttccaggcacgcgtgcagatgttcaagattcacttgggcgacacccccaacacg
cttgtcgacgaagactggctggaactagggaggcgtacagagatgtactcgggtagcgat
atcgagaacgttgtgcgcaacgctctgatggagtgcatccgcacgctgcaggtggcgaca
cacttcaagcgcgttgtcggccctgacccgcacgaccccacacgcatggtgaagaatcgt
ttgctgccgtgctcgcctggtgacccggacgcgttcccgatgtcggcggtggagatcacg
gagccggagctgctcatgccgatgccggtgaccaaggaggacttcataaaggcgctgcgc
accagcaaaccctccgtgaatgacgaggatattgagcggcacgtcaagttcactgcggac
tttggccaggagggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (44)   

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