KEGG   Leishmania infantum: LINJ_36_2970
Entry
LINJ_36_2970      CDS       T01112                                 
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
lif  Leishmania infantum
Pathway
lif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LINJ_36_2970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lif03041]
    LINJ_36_2970
Spliceosome [BR:lif03041]
 Complex C
  Other components
   Step II factors
    LINJ_36_2970
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 HA2_N AAA_30 AAA_19 nSTAND3 AAA_23 AAA_7 SRP54 AAA_33
Other DBs
NCBI-GeneID: 5073560
NCBI-ProteinID: XP_001469459
UniProt: A4ICJ0
Position
36:complement(1152683..1155946)
AA seq 1087 aa
MNVVDDTVAALGDDDAIAEQQNMSFLMKLQELYCKTVLYEQLEQMMGHPATQEESDGYLD
DVEGLVKLYCSEREAAKKMVPQGEEADAAAQREEVTEQHILHSLSVAINGEAEADEQPDI
PVSSIQQLYHVLHDCLTTDTVETGLAVGSLLLADDAKRSAEEAARLAYQQQQRHMHGGVD
TASMNTSTAERKNAMKVSPEEMFRLAQHVRSGLADEAELLKLRSEDNEEEGGGAQDVELN
DEEPRFLRNMGFSSMLHRRINYRAPLPSQQLRDARTPQHRQAILDRLAQRQQGDSSKLNS
MEAVAQMQEKINMERRVIARKAQRTQQQFREYDFGATMGGRDDRSVLDEDRYGRRGGALE
SEEYSAQPTLLHSELNALPEEGGFRPQDMPTKLAPWMKHSFGRKPRFGLPETMQTIQEQR
ISLPIYAKKEALLNFVDAHRVTVLVGETGSGKTTQIPQYLAEHGYADRGMIACTQPRRVA
AETLAMRVAEEYGCRLGEEVGYTVRFRDVTSSLTKIKYMTDGMLLREALLDDSFQRYSVI
ILDEAHERSISTDLLFAIVRQALRKNEVLKVMVTSATLETEKFCAYFGASEPFRIEGRTF
PVETYYLTDPTTDYVRAALQTVMMIHLQEPPGDVLVFFTGQEEIELGGEQLFRWMEMLRR
QVSTPLPDLMVLPLTATMPQEVQSKVFEPTPPGCRKVVLATNVAETSITIANLYYVVDSG
FCKQNIFDAKHGIDQLKVMPVSQAQAKQRSGRAGRIGPGKCYRMYTEKQFTTDMVPETVP
DIMRTSLFHVTLQLKAMGLDLLNLELMDCPPKGAIVSALEKLRYLEALDDDGLLTPLGSR
MAQLSIDPSQSKTLLTAVDLGCSEPVLTIVSMLAVQKRGVFYRPRDQQDASDAARRQFMQ
PEGDQLTLMAVYDAWVENGMSEDWSKHNFLKHRMLVEARDTRDQLKEMLARRNQHISHEN
DTNLDEVRKSITAGYFFNAARRVDSHTRSYVTLSDRREVYVHPSSVLIDDPPKYVLYDDL
RMTKREYMTELLAIEPKWLVELAPAFYARPKEGRLTKEQAAERFTPILKSWETGSSWRIS
RLKKQRR
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgaacgttgtcgacgacactgtggcggcactgggcgacgacgacgccatcgccgagcag
cagaacatgtctttcctcatgaaactgcaggaactgtactgcaagacggttctttacgag
cagctggagcagatgatgggccaccccgccacccaagaagagagcgacggctaccttgac
gacgtggaagggctcgtcaagctctactgctccgagagggaggcggcgaagaaaatggtg
ccgcaaggtgaggaggccgacgccgctgctcaacgtgaggaggtgacggagcagcacatc
ctgcactctctctccgttgctatcaacggcgaggccgaggcagacgagcaacccgacata
cctgtgtcaagcattcagcagctgtaccacgtcctccacgattgcctcaccacggacacg
gtagagacagggctcgctgtcgggtcattgctgctggccgatgatgccaaacgtagcgct
gaggaggcggctcgtcttgcctatcagcagcagcagcgtcacatgcacggcggcgttgac
acggccagcatgaacacctccactgcggagcgcaagaatgccatgaaggtctcgccagag
gagatgttccgcctcgcccagcacgtccgcagcggtcttgccgatgaagcggagctgctc
aaattgcgctccgaggacaacgaggaagaaggcggcggcgcgcaggacgtggagctgaac
gacgaagaacctcgcttcttgcgcaacatgggcttctcctcgatgctgcaccgtcgcatc
aactaccgtgcaccgctgccgtcgcagcagctccgtgacgcccgcacgccgcagcatcgt
caagccatcttggacaggctcgcccagcgtcagcagggcgactcgtcaaagctgaacagt
atggaggcggtggcgcagatgcaggagaagataaatatggagcgccgcgtcattgcccgc
aaggcgcagcgtacccagcagcagttccgcgagtacgactttggggcgaccatgggcggt
cgcgatgataggtcggtgctcgacgaggaccgctacggacggagaggcggggcgcttgaa
agcgaggagtactcggcacagcccacccttctgcactcggagctgaacgcgctgccggag
gagggcggcttccgaccacaggatatgccgacgaagctggcgccgtggatgaaacacagc
tttggacgcaagccgcgctttggcctgcccgagactatgcagacaatacaggagcagcgc
atctccctcccgatttacgcgaagaaggaggctcttctgaacttcgtagatgcgcacagg
gtgaccgtacttgtcggagagacaggcagcggcaagaccacgcagattccgcagtacctg
gcggagcacgggtacgccgatcgaggcatgatcgcctgcacgcagccccgccgtgtcgcc
gccgagacgcttgccatgcgcgtcgctgaggagtacggctgccgccttggcgaggaggtc
ggttacaccgttcgcttccgcgatgtcacctcgtctctgacaaagataaagtacatgacg
gacggtatgctgctgcgcgaagcgctgctggacgacagcttccaacgctacagcgtcatc
atcctcgacgaggctcacgagcgatccatcagcaccgatctgctcttcgccatcgtgcgg
caggcgctgcggaagaacgaggtgctgaaggtgatggtgacatccgccaccctcgagacg
gagaagttctgcgcctactttggcgcctctgagccttttcggattgagggtcgcacgttc
cccgtggagacgtactacctcaccgaccccaccaccgactacgtgcgagccgccctgcag
acggtcatgatgattcacctgcaggagcctccaggggacgtccttgtctttttcactgga
caggaagagatcgagctgggcggggagcagctgtttcgctggatggagatgctgcggcgg
caggtgagcacgccgttgcctgacttgatggtgctgcctctcacggccaccatgccgcag
gaggtgcagtcgaaggtgttcgagcccaccccacccgggtgccgcaaggtcgtactggcc
acgaacgtcgcagagacatcgatcactattgccaacctctactacgttgttgacagcggc
ttctgcaagcagaacatcttcgacgccaagcacggcatcgatcagcttaaggtgatgccg
gtttctcaagcgcaggcgaagcagcgctccggtcgtgcggggcgtatcgggcctggaaag
tgctaccgcatgtacacggagaagcagttcacgacggacatggtgccggagacggtgcca
gacattatgcggacaagcctcttccacgttaccctgcagctgaaggccatggggctcgat
ctccttaacctcgagctcatggactgccctccgaagggggccattgtgtcagcgctagag
aagctgcgataccttgaggcgctcgacgacgacggactgctgaccccgctagggagccgc
atggcgcagctgtccatcgacccctcgcagagcaaaacgctgctcactgcggtggacttg
ggttgcagcgagccggttctcacaattgtgtcgatgctagcagtgcagaagcgtggcgtc
ttctaccgccctcgagatcagcaagatgcgtctgacgcggcgcgacgccagttcatgcaa
ccggagggtgatcagctcacactcatggcggtctatgacgcctgggtggagaacggcatg
tccgaggactggagcaagcacaacttcctgaagcaccgcatgctggtcgaggcgcgcgac
acacgcgaccagctcaaggagatgctggcgcggcgcaaccagcacatatcacacgagaat
gacacaaacctcgacgaggtacgcaagtccatcacggccgggtacttcttcaacgcggcg
aggcgtgtcgactcgcacacccgctcgtacgtcacactgtccgacaggcgtgaggtttac
gtgcacccctcctcggtgctcatcgacgacccacccaagtacgttctgtacgacgatctc
cgcatgacgaagcgggagtacatgacggagctgctggcgatcgagccgaagtggttggtg
gagctggcgccagccttttacgcaagaccgaaggaagggcgtctcactaaggagcaagcc
gctgagcggttcacaccgatcctaaagtcgtgggaaacaggcagctcctggcgtatctca
cgtctcaagaagcagcggcgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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