KEGG   Limnohabitans sp. 63ED37-2: L63ED372_00824
Entry
L63ED372_00824    CDS       T04121                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lih  Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:lih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lih03019]
    L63ED372_00824 (rnc)
   03009 Ribosome biogenesis [BR:lih03009]
    L63ED372_00824 (rnc)
   03036 Chromosome and associated proteins [BR:lih03036]
    L63ED372_00824 (rnc)
Enzymes [BR:lih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     L63ED372_00824 (rnc)
Messenger RNA biogenesis [BR:lih03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     L63ED372_00824 (rnc)
Ribosome biogenesis [BR:lih03009]
 Eukaryotic type
  90S particles
   RNase
    L63ED372_00824 (rnc)
 Prokaryotic type
  rRNA processing factors
   L63ED372_00824 (rnc)
Chromosome and associated proteins [BR:lih03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     L63ED372_00824 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ALK88046
UniProt: A0A0P0LP90
Position
857887..858579
AA seq 230 aa
MATSPVLSELQVRLGYAFRQQALLQQAVTHRSFSADHNERLEFLGDSVLNLSVAHLLYTQ
LANLPEGDLSRVRANLVKQDTLHQLAKTLDLPAVMRLGEGEMRSGGQNRPSILADALEAI
IGAVYLDGGYKDAQALVERLFAQVDIKPDMQAVGKDPKTELQEWLQGRKLALPKYTVVGT
SGAAHRQQFEVSCEVTELRQTQQGSGASRRAAEQAAAAAMLLTLKSESAA
NT seq 693 nt   +upstreamnt  +downstreamnt
gtggcgacttcccccgttctgtccgaattgcaagtccggctgggttacgccttccgtcag
caagctttgctgcagcaagcggtcacgcaccgcagcttcagtgccgaccacaacgagcgc
ctggaatttttgggtgactcagtgctcaacctgtcggtggcccacctgctgtacacgcaa
ctggccaatttgcccgagggcgatttgtcgcgggtgcgggccaacctggtcaagcaagac
acgctgcaccaactggccaaaaccttggacttgcctgccgtgatgcgattgggcgagggg
gagatgcgctcgggcggtcaaaaccgtccgtccattctggccgatgccctggaagccatc
attggcgcggtttacctggacggcggctacaaggatgcacaagccttggtcgagcgactg
tttgcccaggtcgacatcaaacccgacatgcaggctgtgggcaaagaccccaagaccgaa
ttgcaagagtggctgcaagggcgcaagctcgcgctgcccaaatacaccgtggtcggcacc
tccggggcggcgcaccgccagcagttcgaggtctcttgcgaagtgactgaattgcgccaa
acccaacaaggctcgggcgcatcgcgtcgcgctgccgaacaagcagcggcagccgccatg
ctgctcaccttgaaatccgaaagcgccgcatga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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