KEGG   Limnohabitans sp. 63ED37-2: L63ED372_01226
Entry
L63ED372_01226    CDS       T04121                                 
Symbol
appA
Name
(GenBank) Oligopeptide-binding protein AppA precursor
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
lih  Limnohabitans sp. 63ED37-2
Pathway
lih02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lih00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    L63ED372_01226 (appA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lih02000]
    L63ED372_01226 (appA)
Transporters [BR:lih02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    L63ED372_01226 (appA)
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ALK88437
UniProt: A0A0P0M8S2
Position
1267842..1269632
AA seq 596 aa
MDEKAVRGLIEQVRENVISRKDFIRNMLGYGLTVPMAAQMLLTSGLAQAQTASAYKPTKR
GGGGPLKLLWWQGPTLLQPHFASGTKDQEGSRIFYEPLGAWDSDGNMIPILAAEVPSSAN
GGVSRDGKTITWKLKRNVQWHDGRPFTADDVVFTYEYALDPATAAYTAGTYKDIKVTKVD
SHTVRVEYQKASPFWADPFCSAAGMIIPKHVFGAFKGATSRDAPANLKPVGTGPYKFLDF
KPGDMLRGVINTNYHEANRPYFDTIEMKGGGDAVSAARAVLQTGEYDYAWNLQVEDELLL
RLEQGGKGKTYITLGGNIEFIQLNLADPWTEIDGERAHPSSKHPILSELAVRQALNMLVD
RAGIQKFIYGRTGIATANFLNNPQRFASKNTKFEFNIDKAIQVLETAGWKKGSDGIREKG
GKKLKFVFQTSINGPRQKTQQIIKQAAQRAGIDLELKSVPASVYFSSDPANPDTYTKFFC
DIQMFTTTMPQPDPEVFMNQYLSNQFATKANKWLGRNSTRYSNPEYDKAYLEAQSEMDPV
KRAALFIKMNDMPINDVAIIPVVYRPRTAGAVNNLVAPLSGWDNDLWMLKDWYRNV
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggatgaaaaagcagtgcgcggattgattgaacaggtccgggaaaatgtcatcagccga
aaggacttcattcgcaacatgctcgggtatggattgaccgtgccgatggccgctcaaatg
ctgttgacttctggcctggctcaggcccaaacggcttccgcctataagcccaccaaacgc
ggtggcggcggtccattgaaattgctctggtggcagggccccacattgctgcagcctcac
tttgccagtggtaccaaagaccaagaaggctcgcgcattttttatgagcccttgggtgcc
tgggacagcgatggcaacatgattcccattttggccgctgaagtgccgtcttccgccaac
ggtggcgtttccagggacggtaaaaccatcacctggaagttgaagagaaatgtgcagtgg
cacgatggcaggccattcacggctgacgatgtggtgttcacctacgaatatgctttggat
ccggcaactgccgcttacaccgcaggcacctataaagacatcaaagtgaccaaggtcgac
agccacacggtcagggtggagtaccagaaggcttcgccgttttgggcggacccgttttgc
agtgccgctggcatgatcattccgaaacatgtttttggagccttcaaaggggccacatcg
cgcgacgcaccggccaacctcaaacccgtgggcactggcccctacaaattcctggatttc
aagccgggcgacatgttgcgcggtgtgatcaataccaattaccacgaagccaatcgcccc
tactttgacaccatcgagatgaagggcggcggggacgctgtgtcggcggcgcgcgctgtg
ttgcaaaccggtgagtacgactacgcctggaacttgcaagtcgaagacgagttgttgctt
cgcttggaacaaggcggcaagggcaaaacatacatcaccctgggtggcaacatcgagttc
attcaactcaacttggccgatccctggaccgaaattgacggtgagcgtgcccaccccagc
tccaaacaccccatcctgtcagagctggccgtgcgccaagccctgaacatgttggtagac
cgtgcgggcattcagaaattcatttatggacgcaccggcattgccacggccaacttcctg
aacaacccccagcgcttcgcttccaaaaacaccaaattcgagttcaacatcgataaagcc
attcaggtgctggagacggctggctggaaaaaaggctcagatggcattcgcgaaaaaggt
ggcaaaaaactcaagtttgtgttccagacatccatcaatggcccacgccaaaagactcag
caaatcatcaagcaagcggcgcaacgggcgggcattgatttggaactgaagtcggtgccg
gcctcggtgtatttttcgtccgaccccgccaacccggacacttacaccaagttcttttgc
gacatccagatgttcaccaccaccatgccgcagcccgaccctgaggtgttcatgaaccag
tacctgagcaaccagtttgccaccaaggccaacaagtggctcggacgcaattccacgcgt
tacagcaacccggagtacgacaaagcctacctggaggcgcagtctgaaatggacccggtc
aaacgggccgccttgttcatcaaaatgaacgacatgcccatcaatgacgtggccatcatt
cctgtggtttaccggccgcgcactgcgggtgccgtgaacaacctggtcgcgcctttaagc
ggctgggacaacgacctgtggatgctcaaagactggtaccgaaacgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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