KEGG   Limnohabitans sp. 63ED37-2: L63ED372_01352
Entry
L63ED372_01352    CDS       T04121                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lih  Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:lih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lih03016]
    L63ED372_01352 (truB)
Enzymes [BR:lih01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     L63ED372_01352 (truB)
Transfer RNA biogenesis [BR:lih03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    L63ED372_01352 (truB)
 Prokaryotic type
    L63ED372_01352 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ALK88561
UniProt: A0A0P0LQH6
Position
1401937..1402917
AA seq 326 aa
MNAPRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKGGHTGTLDPLATGVLPLC
FGAATKFSQQHLDADKTYETTVRLGIKTSTADAEGEVIAVREVSCSAGMVVEVLDRFMGP
ISQVPPMHSALKKDGKALYEYAREGETVEREARNVVIHDLDLLDMQLQGDAPFLRLRVRC
SKGTYIRTLGEDIAEALGCGGHLSALRRVVTGPFEEAQCVTLSALENMDESQRIAAMQPV
DVLLPGYTEVCLDSENAGKFLSGVRRRGPWNDCDQVVVYGEHPRALLGTAHVHGGELIPG
RLLSPIEIQQILEKSPVNAPLLAEQV
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaatgcgccacgcacacgggtgcaacggcgccctgtgcacggggtgctgctgctcgac
aaaccgctgggtctttccagtaaccaggctttgcaaaaagccaaatggttgcttcgcgcg
gaaaaaggcggtcataccggaacgctcgaccctttggccacgggggtgttgcctttgtgt
tttggtgcagccaccaagttcagccagcagcatctggatgccgacaagacttacgagacc
acggttcgtcttggcatcaaaaccagcacggctgacgccgaaggcgaggtgatcgctgtc
cgagaagtgtcatgttcggcaggtatggtggtggaagttcttgaccggttcatggggccc
atcagccaagtgccgccgatgcacagtgccttgaaaaaggacggcaaggccttgtacgaa
tatgcccgcgagggcgaaaccgtggagcgcgaagcgcgaaacgtggtcatacatgatctg
gatctgctggacatgcaactgcaaggtgatgcgccttttttgcgtttgcgtgttcggtgc
agcaaaggcacttacatccgaaccttgggcgaagacatcgccgaagcgttgggttgtggt
ggccatttgagcgctttgcgccgggtggtcaccgggccttttgaggaagcccagtgtgtg
acgctgtctgcactggagaacatggatgaaagccagcggattgcggcgatgcagccggtc
gatgtactgctgccgggctacaccgaagtgtgtctggacagcgagaacgcagggaaattt
ttgagtggggtgcgccgtcgcggcccttggaatgattgtgatcaagtcgtggtgtatgga
gaacatcctcgtgccttgctgggaacagcgcatgtgcacggcggcgaattgattccgggt
cgattgttgagcccgatcgaaattcaacagattttggaaaaatcacctgtcaacgcgcca
ttgctggccgagcaggtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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