KEGG   Limnohabitans sp. 63ED37-2: L63ED372_02028
Entry
L63ED372_02028    CDS       T04121                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
lih  Limnohabitans sp. 63ED37-2
Pathway
lih03030  DNA replication
lih03430  Mismatch repair
lih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L63ED372_02028 (dnaX)
   03430 Mismatch repair
    L63ED372_02028 (dnaX)
   03440 Homologous recombination
    L63ED372_02028 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lih03032]
    L63ED372_02028 (dnaX)
   03400 DNA repair and recombination proteins [BR:lih03400]
    L63ED372_02028 (dnaX)
Enzymes [BR:lih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L63ED372_02028 (dnaX)
DNA replication proteins [BR:lih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L63ED372_02028 (dnaX)
DNA repair and recombination proteins [BR:lih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L63ED372_02028 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_18 AAA_14 AAA_5 AAA_30 Rad17 AAA_7 AAA_16 AAA_19 SKI nSTAND3 TsaE AAA_2 Herpes_Helicase DUF815 NTPase_1 PIF1 AAA_28
Other DBs
NCBI-ProteinID: ALK89231
UniProt: A0A0P0MAA6
Position
complement(2119088..2121046)
AA seq 652 aa
MSYLVLARKYRPRNFTEMVGQEHVVQALTNALVQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGVDGLGGITAEPCGVCQACRDIDAGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVFEHLTQVLAAEQLSAEPLALRLLARAARGSMRDALSLTDQAIAFGNGQLQEA
GVRQMLGSVDRSHVLQLIRALAEGDGATVVNQVNALRLQGVSAAATLEDMAMLLQRMAVM
QMVPSMAHDGEDPDTQGLADLAQAMPAEETQLLYSLCLHGRTELGLAPDEYAALTMVLLR
LLAFKPPAGTAEKKSPLSSPSSPPSASASPRAEVFAAPQPAPESAPLNKPLTAPVTAPAS
APLTVPKAAPVVLDSPPPVAAAPQVTPISPPPAAQPAPLASDEPPPWEDWPDTTDYADQG
GLTSAPAVVAPTPAALRALPVREAPEPSSRLDMPRAAAPAAVQPTPEGDVWMAVVQGLLD
QETITALVRELALQSQLLGRDGAQWQLRVERETLNHAASRERLQAALLAAGHGDVKLHIE
IGPVSDSPARRLAVKAAEKMLAAQELIQNDPLVQAMVRDFGAKIVPGSIQLI
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgtcttaccttgtcctcgcgcgcaaataccgcccccgcaatttcaccgaaatggtgggg
caggagcatgtggtgcaggccttgaccaatgccttggtgcagcagcgcctgcaccatgcc
tacctgttcaccggtacccggggcgtgggcaagaccacggtgtcgcggattttggccaag
tcgctcaattgccagggcgtggacgggctgggcgggatcaccgctgagccgtgcggcgtg
tgccaggcttgccgcgacatcgacgccggtcgttttgtggactacaccgagctggatgcc
gcatcgaaccggggtgtggacgaggtgcaaagcctgctggagcaggcggtttacaaacct
gtgcaggggcgcttcaaggtcttcatgatcgacgaggtgcacatgctgaccaacactgcg
ttcaacgcgatgttgaagaccctggaagagcccccagaatatttgaagttcgtgctggcc
acgaccgacccgcaaaaggtgccggtgacggtgctctcgcgctgcctgcagttcaacctg
cggcccatggcccccgaaaccgtgtttgagcacctgacccaggtcttggcggctgagcag
ctgagcgccgagccgctggctttgcgcctgctggcccgcgccgctcgcggctcgatgcgg
gatgcgctcagtctgaccgatcaggccattgcctttggcaacggccaattgcaagaagcg
ggcgtgcgccagatgctgggcagtgtggaccgcagccatgtcttgcaactcatccgggct
ctggccgaaggcgatggggccaccgtggtgaaccaagtcaacgctttgcggctgcaaggc
gtgtcggccgccgccacactcgaagacatggccatgctgctgcagcgcatggcggtgatg
cagatggtgcccagcatggcgcacgacggcgaagaccccgacacccagggtttggccgat
ctggcccaagccatgcccgccgaagaaacccaattgctctacagcctgtgcctgcatggc
cgcaccgagttgggcctggccccggacgagtacgctgcgctgaccatggtgttgctgcgc
ttgttggccttcaagcccccagcgggaacggcggaaaaaaaaagcccgctgagcagccct
agttccccaccaagcgccagcgccagcccccgggccgaagtgttcgctgcaccccagcca
gcgccagaatctgcgcccctgaataaaccactcaccgccccggtcactgccccggcatct
gcccccttgacagtgcccaaggccgccccagtggtgttggacagcccgccacccgtcgcc
gctgcaccccaggtcacacccatttcaccccccccggctgcgcagccagcaccgctggcc
agcgacgagccgccgccttgggaggattggcccgacacgaccgactatgccgatcaaggc
ggtctgacttcagccccggcagtggtggccccaacgcctgcggccttgcgtgctttgccc
gtgcgtgaagcgcctgaaccctcgtcgcgcttggacatgccccgcgcggcggcccctgct
gcggtgcagcccacccccgaaggcgatgtctggatggcggtggtgcaaggcctgttggac
caagagaccatcaccgcactggtgcgagagttggctttgcagtcgcaattgttggggcgc
gatggtgcgcagtggcagctgcgtgtggagcgcgaaaccctgaaccacgccgccagccgg
gagcggctgcaagcggctttgctggcagcgggccatggcgatgtgaaactgcacatcgag
atcggcccggtgagcgacagcccagcccgacgcctggccgtgaaagccgccgagaaaatg
ctggccgcgcaagagctcattcaaaacgaccccttggtgcaggcgatggtgcgtgatttt
ggggccaaaattgtgcccggcagcatccagctgatttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (36)   

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