KEGG   Limnohabitans sp. 63ED37-2: L63ED372_02195
Entry
L63ED372_02195    CDS       T04121                                 
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
lih  Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:lih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lih03400]
    L63ED372_02195 (phrA)
Enzymes [BR:lih01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     L63ED372_02195 (phrA)
DNA repair and recombination proteins [BR:lih03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    L63ED372_02195 (phrA)
 Prokaryotic type
    L63ED372_02195 (phrA)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Usp TRPM_tetra
Other DBs
NCBI-ProteinID: ALK89398
UniProt: A0A0P0MA90
Position
2337570..2339045
AA seq 491 aa
METPFSCGLVWLRRDLRVSDHAALHQALKHCQRVHVAFVFDTEILDALPRADRRVEFIRE
SLVEVDARLRELAGHPQAGLIVRHGVAKDKIVKLAQHLQAQVVFANHDDEPLALARDIQV
RGHLADHGIVLHTYKDHVVFERNEVLTQMAKPFSVFTPYKNAWLKKVTPEDLRAFEVAPL
ATRLAPRPDDLAQPVPSLADMGFETTNLQALKIPTGESGAQALLQDFLTRIDQYEDTRNF
PAVKGPSYLSVHLRFGTVSIRQLAREAHPRMLAGSVGASVWLSELIWRDFYVQVLHNFAH
VGRGQSFKPEYDAIEWEHGPHAHKLFNAWCEARTGYPLVDAAMRQINQTGYMHNRLRMVV
ASFLVKDLGIDWRWGEKYFATHLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPISQSEK
FDPEGKFIRRYVPELADLPTAALHAPWLAKPMELQAAGVVIGKTYPAPIVDHAEAREITL
ARYAVVKKKTD
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggaaacccctttttcttgcggcctggtctggctgcggcgcgatctgcgcgtgagtgac
catgcggccctgcaccaggccctgaagcactgccagcgtgtgcatgtggcgtttgtgttc
gacaccgaaatcctggacgctctgccccgtgccgatcgccgggtcgagttcatccgcgag
tcgctggtcgaggtggatgcccgcttgcgcgagttagcaggccacccccaggctggcctg
atcgttcgccacggcgtggccaaggacaaaatcgtcaaactggcccagcacctgcaggcc
caggtggtgtttgccaaccacgacgacgagcccctggcgctggcccgcgacatccaggtg
cgcggccacttggccgaccatggcatcgtgctgcacacctacaaggaccatgtggtgttt
gagcgcaacgaggtgctgacgcagatggccaagcccttcagcgtgttcacgccctacaaa
aatgcctggttgaagaaagtcacacccgaagacctgcgggctttcgaagtggcacctctg
gccactcgcctggccccgcgccccgacgatctggcgcagccagtgcccagcctggccgac
atgggctttgagaccaccaacctgcaagccctgaaaatccccacgggcgagtcgggcgct
caggctctgctgcaagactttttgacccgcattgaccagtacgaagacacacgcaacttc
cccgctgtcaaaggcccaagctatttgagtgtgcatttgcgctttggcacggtgtcgatt
cgccagctggcccgcgaggcgcacccccgcatgttggcgggcagcgtgggggccagcgtg
tggctgtcagagctgatttggcgcgacttttatgtgcaggtgctgcacaactttgcccat
gtgggccgaggccaaagcttcaaacccgaatacgacgcgattgaatgggagcacggccca
cacgcccacaaactgttcaacgcctggtgcgaagcccgcaccggttacccgctggtggac
gcggccatgcgccaaatcaaccagacgggctacatgcacaaccgcctgcgcatggtggtg
gcgagctttttggtgaaagatttgggcatcgactggcgctggggcgagaagtacttcgcc
acccacctgaacgacttcgatttatcggccaacaacggtggctggcagtgggccagctcg
agcgggtgtgatgcgcagccctacttccgcatcttcaacccgatcagccaaagcgaaaag
ttcgaccccgagggcaaattcatccgccgctatgtgccggaactggccgatttgccaacg
gccgcattgcacgcgccgtggctggccaaacccatggagttgcaagcggcgggggtggtg
atcggcaagacctaccctgcccccatcgtggaccacgccgaagcccgagaaataactttg
gcgcggtacgccgtggtcaagaaaaaaacagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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