KEGG   Limnohabitans sp. 63ED37-2: L63ED372_02548
Entry
L63ED372_02548    CDS       T04121                                 
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
lih  Limnohabitans sp. 63ED37-2
Pathway
lih03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lih00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    L63ED372_02548 (rppH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lih03019]
    L63ED372_02548 (rppH)
Messenger RNA biogenesis [BR:lih03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     L63ED372_02548 (rppH)
SSDB
Motif
Pfam: NUDIX NUDIX_4 PI31_Prot_C DUF2244
Other DBs
NCBI-ProteinID: ALK89748
UniProt: A0A0P0MAW9
Position
2702184..2702804
AA seq 206 aa
MLDREGFRPNVGIILLNQKNQVFWGKRIRTHSWQFPQGGIDRGESPEQAMFRELHEEVGL
QPEHVRIVARTRDWLRYEVPDRFIRRDARGFYKGQKQIWFLLQMVTHDHHLNLRATDHPE
FDAWRWNDYWVPLDVVVEFKRGVYEMALTELARFLPRQERQNRYLRGGSRPQRDQAMDHD
HGHGEMQPPVHMELPPGASFDPNPQG
NT seq 621 nt   +upstreamnt  +downstreamnt
atgcttgaccgtgaaggctttaggccgaacgtcggcatcattctgctcaaccagaaaaac
caggttttctggggcaagcgcatcagaacccacagctggcagtttccgcagggtggcatt
gaccggggggaaagccccgaacaagccatgttccgtgaactgcacgaagaagtggggctc
caaccggagcatgtgcgcattgtggcccggacccgtgactggttgcgctatgaggtgcca
gaccgcttcatccgacgggatgcacgcggcttttacaagggccagaaacaaatctggttc
ctgttgcagatggtgacgcatgaccaccacctgaatttgcgggccaccgaccacccggag
ttcgacgcttggcgttggaacgactattgggttccgctcgatgtggtggtggagttcaag
cgcggcgtttatgaaatggcactgaccgagttggcgcgttttctgccccgccaagaacgc
caaaaccgctatttgcgcggtggcagtcgccctcagcgagatcaagccatggaccacgat
cacggccatggtgagatgcaaccccctgtgcacatggagttgcccccgggggccagcttc
gaccccaacccacaaggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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