KEGG   Limnohabitans sp. 103DPR2: L103DPR2_00554
Entry
L103DPR2_00554    CDS       T04120                                 
Symbol
ntrC
Name
(GenBank) Nitrogen assimilation regulatory protein
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
lim  Limnohabitans sp. 103DPR2
Pathway
lim02020  Two-component system
lim02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lim00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L103DPR2_00554 (ntrC)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    L103DPR2_00554 (ntrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lim03000]
    L103DPR2_00554 (ntrC)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:lim02035]
    L103DPR2_00554 (ntrC)
Transcription factors [BR:lim03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    L103DPR2_00554 (ntrC)
Bacterial motility proteins [BR:lim02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    L103DPR2_00554 (ntrC)
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA HTH_50 AAA_2 AAA_22 HTH_30 AAA_30 AAA_7 CUE AAA_3 nSTAND3 APS_kinase TIP49
Other DBs
NCBI-ProteinID: ALK90961
UniProt: A0A0P0MD79
Position
580222..581412
AA seq 396 aa
MAKKSLSKAFIGASAGAEAIRHLIERVASSTATVLITGESGTGKELVARALHDQSDRSGG
NFVPINCAAIPKDLLESELFGHRKGAFTGAMADRIGRFELAHGGTIFLDEIGDLSLDMQV
KLLRVLQERTVDPVGGLKSVEVDVRVVAATHRDLEAEIEAGRFREDLYYRLNVLPLNTPA
LRQRAQDVPALLAHFAELFATKGQTPITFTADFIEALKDYAWPGNVRELSNLVDRFNTLF
SGQLLSLASVPSSLLPKGLRTLQAERVSTPIVDSLEIVAPLSSKELHQSANAEVMNPFAN
PAPPLAMDMHNEVEDIIMLAQGLPSLPPEGLSLKDRLADIERDLIVQALNRTDGNVSQTA
RLLNLQRTTLIEKLNKYDLRQGTLPVAGNEDDKKTA
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggctaaaaaaagtctttccaaagcttttattggcgccagtgctggcgctgaggccatt
cggcatttgatcgaacgggtggcttcgtccacggccaccgtgctcattaccggcgaaagt
ggcacaggcaaggagttggtggcccgtgctttgcacgaccagtccgaccgaagtggcgga
aattttgtccccatcaattgcgcagccatccccaaagatttgctcgaaagcgaattgttt
ggccaccgcaaaggcgctttcacaggcgccatggccgatcgcattggccgttttgagttg
gcccatggcggcaccatctttttagacgagattggcgatctgtctttggacatgcaggtc
aaactgctgcgcgtcttgcaagaacgcaccgtcgatccggtaggcggtttgaaatctgtg
gaagtggatgtgcgcgtggtcgctgccacccaccgcgacttggaagccgaaattgaagcc
gggcggtttcgggaagacttgtattaccgcctgaacgtgctgcccttgaacacgcccgct
ttgcgtcaaagagcgcaagatgtaccggccttgctggcgcatttcgcggaactctttgcc
accaaaggccagacccccatcacgtttacagcggatttcattgaagccctcaaggactat
gcgtggcctggcaatgtgcgcgagttgtccaacttggtggaccggttcaataccttgttc
agtggtcagttgctcagcttggcatcggtgccttcgtccttgttgcccaaggggttgcgt
actttgcaagctgaacgggtcagcacccctattgtcgattccttggaaattgtggcgccc
ttaagctccaaagagttgcaccaaagtgccaatgccgaagtgatgaacccctttgccaat
cctgcgccgcccttggccatggacatgcacaacgaggtggaagacatcatcatgctggcg
cagggcttgcccagtttgccgcccgaggggctttccttgaaagaccgcttggcagacatc
gagcgcgacttgattgtgcaagcactcaatcgcaccgatggcaatgtgtcgcaaacagct
cgcttgctgaatttgcagcgtaccaccctgattgaaaaactcaacaagtacgacttgcgt
caaggcaccttgcccgttgcaggcaacgaagacgataaaaaaaccgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (304)   
   KEGG ORTHOLOGY (1)   
   RefGene (301)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (328)   

Download RDF
DBGET integrated database retrieval system