KEGG   Limnohabitans sp. 103DPR2: L103DPR2_01279
Entry
L103DPR2_01279    CDS       T04120                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
lim  Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:lim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lim03032]
    L103DPR2_01279 (gyrA)
   03400 DNA repair and recombination proteins [BR:lim03400]
    L103DPR2_01279 (gyrA)
Enzymes [BR:lim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     L103DPR2_01279 (gyrA)
DNA replication proteins [BR:lim03032]
 Prokaryotic type
  DNA Topoisomerases
   L103DPR2_01279 (gyrA)
DNA repair and recombination proteins [BR:lim03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      L103DPR2_01279 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C RIG-I_C
Other DBs
NCBI-ProteinID: ALK91681
UniProt: A0A0P0MEZ4
Position
complement(1291187..1293847)
AA seq 886 aa
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSRIPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPEATIDELMEIIPAPDFPTAGIIYGISGVKEGYRTGRGRV
VMRAKCHFEDIDKGQRQCIVVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALIDGQPKLCNLKDLISVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIAIIRNAPTPPVAKAELMTRRWDSKLV
REMLTRTRADGGAVNADDYRPDGLEKDFGMGNDGLYRLSDTQAQEILQMRLQRLTGLEQD
KIVVEYKEVMSEIEDLLDILAKPERVSVIIGEELGELRQEFGQTKVGARRSFIENNAQDL
ATEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLPLTGDMRSFPADH
YVFMGTSMGTVKKTSLDEFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMMLDETQSVIAMLVAEDEQQSVLTATENGFGKRTSIVEYTR
HGRGTKGMIAIQQSERNGKVVAATLVRAEDEIMLITDTGVLVRTRVSEIREMGRATQGVT
LIGLDDGAKLSGLQRIVENDANAHDDSEAQDAEGDAGETAEGSAAE
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgacccagtttgccaaagaaacccttcccatcagtctagaagaggaaatgcgccgcagc
tacctcgactacgccatgagcgtgattgtgggacgcgccctgcctgatgcacgagatggc
ctcaagccagtgcatcgccgtgtgttgtttgccatgcacgagttgaacaacgactggaat
cgcgcttacaaaaaatctgcacgtatcgtgggtgacgtgattggtaaataccaccctcac
ggcgaccaatctgtctatgacaccatcgttcgcatggcgcaagatttctccatgcgccac
atgctggtcgacggccaaggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaaattcgcttggccaaaattgcccatgaaatgttggccgacatcgacaaa
gaaaccgtcgactttggacccaactacgacggctctgaaaaagaacctttggtcttgccc
agccgtattcctaacctgctggtgaatggctctggcggtattgcggtcggcatggcgacc
aacattccaccccacaatttgaacgaagtggttgacgcttgcttgcatttgctgcgcaac
cccgaagccaccatcgacgagttgatggaaatcattcccgcccccgacttccctacggcc
ggcatcatttacggcatcagtggcgtgaaagaaggctaccgcacaggccgcggccgtgtg
gtgatgcgcgccaagtgccactttgaagacatcgacaaaggccagcgccagtgcatcgtg
gtggacgagctgccctaccaagtgaacaagaagaccttgcaagaacgcatggccgaattg
gttcacgagaaaaagatcgaaggcatcagccacattcaagatgagtccgacaaatcaggc
atgcgcctggtcattgaactcaagcgcggtgaagtgcctgaagtggtgttgaacaatctg
tacaaacagacgcaactccaagacacctttggtatcaacatggtggccctcattgatggc
cagcccaagttgtgcaacttgaaagacctcatcagcgtgttcttgcaacaccgccgtgaa
gtggtcacacgtcgcacggtgtttacgttgcgcaaagcgcgcgagcgtggtcacgtattg
gaaggtttggccgttgcactggccaacatcgacgagttcattgccatcattcgcaatgcg
cccacaccgcctgtagccaaagccgagttgatgacccgccgttgggacagcaagctggtc
cgcgaaatgctcacacgcactcgcgccgatggtggtgctgtcaatgcagacgactaccgt
cccgatggtttggaaaaagacttcggcatgggcaacgacggcttgtaccgcctcagcgac
acgcaagcccaagaaattttgcagatgcgtttgcaacgcttgaccggtctggaacaagac
aagattgtggttgagtacaaagaagtgatgtctgagattgaagacttgctcgacatcttg
gccaaaccagaacgcgtctccgtcatcatcggtgaagagctgggtgagttgcgccaagaa
tttggtcaaaccaaagtcggtgcacgccgcagcttcattgaaaacaacgcccaagatttg
gcaactgaagacttgatcacgccgaccgacatggtggtcaccctgtctcacagcggttac
atcaagagccaacctttgtctgaataccgcgcccaaaaacgcggcggtcgcggcaagcaa
gccacggccaccaaagaagacgattggatcgatcagctcttcattgccaacacgcacgat
tacatcttgtgcttctccaaccgtggccgtttgtactggctcaaagtgtgggaagtacct
gcgggttcacgcggttcacgcggccgacccatcgtcaacatgttccccttgcaagaaggc
gaaaagatcaatgtggtcttgcctttgacaggcgacatgcgcagcttccctgccgatcat
tacgtgttcatgggcacctccatgggcactgtgaagaaaacatctttagatgaattcagc
aaccctcgcaaggccggcatcattgccgttgacttggacgaaggcgacttcttgattggc
gccgctttaacggacggcaagcacgacgtgatgcttttcagcgatggcggcaaagccgtg
cgctttgatgaaaacgatgtgcgccccatgggtcgcaatgcacgtggcgtgcgcggcatg
atgctcgacgaaacacaaagcgtgattgccatgctggtggccgaagacgagcagcaaagt
gtgctgaccgccaccgaaaacggtttcggcaagcgcacctccattgtggaatacacacgc
cacggccgtggcaccaaaggcatgattgccatccaacaatctgagcgcaacggcaaggtg
gtggcagccactttggttcgcgccgaagacgagatcatgctgatcaccgacactggcgtg
ctggttcgcacgcgcgtttccgaaattcgtgaaatgggacgcgcaacccaaggcgtcaca
ctgattggcctggacgacggcgccaaattgtctggcttgcaacgcatcgttgaaaacgac
gccaacgcgcacgatgacagtgaagctcaagatgctgaaggcgacgctggcgaaaccgct
gaaggcagcgccgccgaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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