KEGG   Limnobacter sp. SAORIC-580: HKT17_01860
Entry
HKT17_01860       CDS       T06583                                 
Symbol
rplE
Name
(GenBank) 50S ribosomal protein L5
  KO
K02931  large subunit ribosomal protein L5
Organism
limn  Limnobacter sp. SAORIC-580
Pathway
limn03010  Ribosome
Brite
KEGG Orthology (KO) [BR:limn00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    HKT17_01860 (rplE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:limn03011]
    HKT17_01860 (rplE)
Ribosome [BR:limn03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    HKT17_01860 (rplE)
  Bacteria
    HKT17_01860 (rplE)
  Archaea
    HKT17_01860 (rplE)
SSDB
Motif
Pfam: Ribosomal_L5_C Ribosomal_L5 DUF1322
Other DBs
NCBI-ProteinID: QJR28542
Position
402297..402836
AA seq 179 aa
MSRFQEFYRNEVVGQLTKQFGYKSVMEVPRITKITLNMGVGEAVNDKKIIEHAVGDLTKI
AGQKPVVTKAKKAIAGFKIREGYPVGCMVTLRGDRMYEFLDRLVTIAFPRVRDFRGVSGK
SFDGRGNYNIGIKEQIIFPEIEYDKIDALRGLNISVTTTARTNDEAKALLTAFKFPFRN
NT seq 540 nt   +upstreamnt  +downstreamnt
gtgtcacgttttcaagagttttatagaaacgaagtggttggtcagttgaccaagcagttt
ggttacaagtcggtgatggaagtgcctcgcattaccaaaattaccctgaatatgggtgtg
ggtgaggctgtcaatgacaagaagatcattgagcacgctgttggtgatttgactaaaatc
gctggccagaagccggtggtgacgaaagccaaaaaggcgattgccggtttcaagattcgc
gaaggttatccagtaggttgtatggtaactctgcgcggagaccgcatgtatgaattcctg
gatcgtttggtaacgatcgcgtttcctcgtgtgcgcgacttccgtggggtgtctggcaaa
tctttcgatggccgtggcaactacaacattggtatcaaagaacagattattttccctgag
attgagtacgacaaaatcgacgcacttcggggtctcaacatcagcgtaactacgacagcg
cgtaccaacgatgaagcaaaggctttgttgaccgctttcaagttcccgttccgtaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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