KEGG T06583: HKT17

Limnobacter sp. SAORIC-580: HKT17_09685

Entry

HKT17_09685       CDS       T06583

Symbol

truB

Name

(GenBank) tRNA pseudouridine(55) synthase TruB

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

limn Limnobacter sp. SAORIC-580

Brite

KEGG Orthology (KO) [BR:limn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:limn03016]
    HKT17_09685 (truB)
Enzymes [BR:limn01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     HKT17_09685 (truB)
Transfer RNA biogenesis [BR:limn03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HKT17_09685 (truB)
Prokaryotic type
    HKT17_09685 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2

Other DBs

NCBI-ProteinID:

QJR31141

Position

complement(2085638..2086672)

AA seq 344 aa
MVVATVAETKKQKRALSGVLLFDKSTGFSSNQALQIVKRLYRAEKTGHTGTLDPLASGLL
PLMFGEATKFAADVIDASKTYRTKVRLGFSSNTGDAEGELTKVSTRALESITLDEVKQVC
AQFVGEIQQTPPMFSALKKDGKPLYEYAREGIELDRPARTLLIHQLDVMKVEHNTIHGES
SCTIELEVNCSKGTYVRTLGEDIAKALGTAGYLTELRRTAIGDLKVERAYTLDALKVLGE
SETPFDALDAVLFPVDALLGSLGKVELNNEFARRFSHGQRLPLSLVDAKPGRVRVYGETS
AQDVNTEVSNTAFKGNSRFMGTGILETDGKGALLRPDRLIQVNL

NT seq 1035 nt +upstreamnt +downstreamnt
atggtggtggcgacggtggcggagactaagaaacaaaagcgtgccttgtcgggtgtgctg
ttgttcgataaatcaactggtttctcgtccaatcaagccctgcaaattgtaaagcgcttg
tacagggctgaaaaaaccggtcacaccggtacgctagacccgctcgcaagcggtttgctg
ccattgatgttcggtgaggccaccaagtttgcagcagatgtaatcgatgccagcaaaacc
tatcgcaccaaggtgcggcttggtttttcaagcaacacaggtgacgctgagggagaattg
acgaaagtcagcacccgcgcccttgaaagcatcaccttggatgaagtaaaacaggtgtgc
gcgcagtttgttggtgaaattcaacagacgccacccatgttttctgcattaaagaaagac
ggcaagcctttgtacgagtatgctcgcgaaggcattgaattggacagacccgctcggacc
cttttgatccatcaattggatgtcatgaaagtcgagcacaatacaatccatggtgaaagc
agttgcaccattgaactggaagtgaattgcagcaaaggcacctatgtgcgcaccttgggc
gaagacatcgccaaggccttgggcacagcgggctatctcacggaattgcgcagaacagca
attggtgacttgaaagtggaacgcgcgtacaccctggatgcacttaaggtgcttggtgaa
tcggaaaccccctttgacgctttggatgcggtgcttttcccggtagatgcccttttgggc
agcctgggcaaagtcgaattgaacaatgagtttgcgcggcggttttcgcacgggcaacgg
ttgccactgagcctggttgatgccaagccagggcgagtgcgggtgtacggagaaacgtct
gcacaggatgtgaacaccgaagttagcaatacagccttcaaaggcaattcccgattcatg
ggaacaggcattttagaaacggatgggaagggcgccttgcttcgacccgacagattgatt
caggtaaatctatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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