KEGG   Listeria innocua (serotype 6a): lin0443
Entry
lin0443           CDS       T00067                                 
Name
(GenBank) similar to RNA polymerase ECF-type sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
lin  Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:lin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lin03021]
    lin0443
Transcription machinery [BR:lin03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     lin0443
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_30 Phage_antitermQ Sigma70_ECF CelTOS
Other DBs
NCBI-ProteinID: CAC95676
Pasteur: LIN00443
UniProt: Q92EL5
Position
complement(451711..452259)
AA seq 182 aa
MTELEEIGININSIENTEQIISQLMDNYSDDVLHLVFSYVKNRTTAEDLTQEIFIKCYEK
LDQFNNKSSIKTWLYRIAINHCKDYLGSWHYRKLNFSEKIWNYLPSKSKHVEEEIIAKDV
ANSLMSAVMDLPVKYREVVFLHYYEELSLANISKITGVNSNTLKTRLKHARELLKTKMKK
EV
NT seq 549 nt   +upstreamnt  +downstreamnt
atgactgaacttgaagaaataggaattaatattaatagcatagaaaataccgaacaaata
atcagccagttaatggataactacagcgatgatgtactgcatctagttttttcttatgta
aagaatcgaacgacagcggaagatttaacgcaagagatatttattaaatgctatgaaaaa
ctagatcagtttaataacaagtcatccataaaaacgtggctatatcgaattgctattaat
cattgcaaagattacttgggtagttggcattatcgcaaactaaatttcagcgaaaaaatt
tggaattatctcccgtccaagtcaaaacacgttgaggaagaaattatcgcaaaagatgta
gcaaacagcttaatgagcgcggttatggatttacccgtaaaatacagggaagttgttttc
ttacattactacgaagaactctctttagcgaatatcagtaaaattactggtgtaaatagc
aatacattgaaaaccaggttaaaacacgccagagaattattaaaaaccaagatgaaaaag
gaggtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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