KEGG   Listeria innocua (serotype 6a): lin1398
Entry
lin1398           CDS       T00067                                 
Name
(GenBank) similar to exodeoxyribonuclease VII (large subunit)
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
lin  Listeria innocua (serotype 6a)
Pathway
lin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    lin1398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lin03400]
    lin1398
Enzymes [BR:lin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     lin1398
DNA repair and recombination proteins [BR:lin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     lin1398
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: CAC96629
Pasteur: LIN01398
UniProt: Q92BZ3
Position
1391149..1392501
AA seq 450 aa
MEQDKYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLKQPASGHLYFTVKDEFAMLRSV
MFQKAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQL
EKEGLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKA
AQRIVENIGRINQRNDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETD
FALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERALEQLKQ
HLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIALQK
EQIILRKQALDKAMKQQLKDKQQAFIRQVEALEHLSPLALLKRGFGVTYKAGELVKTVQE
LEIGDNIQVKMQGGHIDAHITAKEEDTSGN
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaacaagataaatatttaacggtagccgcaataaccaaatatattgaaaagaaattt
gaagttgatccgtatatgaaacaagtattcgtgcgcggagaaatttctaatttaaaacaa
ccagcgagtggacatctgtattttacggtgaaagatgaatttgctatgcttcgttctgtc
atgtttcaaaaagcagttcaaaagattggttttgttccagaagatggtatgaatgtactt
atcacggggcgaattggcgttttcacaaaagctgggcgttatcagttttatgctgaacat
atggaaccagatggcgtcggtgcactgtatattcaattagaacagctgaaatcacaatta
gaaaaggaaggactttttgcggaagcgcataaaaaagtgcttccttctttcccgtccaaa
gttgcagtagttacatctaaaacaggtgctgctgtaagggatattttaacaacgattcat
cgtagaatgccctcggtggaagtaatcgtgtatcctacagttgttcaaggtgataaggca
gctcagcgaatagtagaaaacattggtcgaatcaatcagcgaaatgatattgatgtgatg
attatcggtcgtggtggtggctctctcgaagaactatgggcttttaatgaagagccagtt
gttcgagcagtttatgattctgatgtacctgtaatctctgcggtaggacatgaaacagac
tttgcgctcagtgatttttcagcagacgttcgagcagcgacaccaaccgcagcagctgaa
ctagcggttccagattatcgcgatttagaagaacgacttgcagaacgtaaatatcgctta
ttagcagttacaaggcagttgttagaacgtaaagaaagagcacttgagcaactaaaacaa
catttaatcttaaatgggccaaaacatcaattagaacagcaaatggaacgtacagattat
tttgctgaacgactaaaaaatgctttttccaagcaagtattgctaaaacaaactactttt
aaccgactaaatgatcgtttacactattaccatcctaagaaagaaatagccttacaaaaa
gagcaaataatattacgtaagcaagcgttagataaagcaatgaaacaacaacttaaagat
aaacaacaagcttttattagacaagtcgaggctttagaacatttaagcccgctcgcttta
ttgaaacgtggatttggtgtaacgtataaagcaggagagttagttaaaaccgtccaagaa
ttggaaattggtgataatattcaagtaaaaatgcaaggtggacacatagacgcacatatt
accgcaaaggaggaagatacaagtggcaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system