KEGG   Lawsonia intracellularis PHE/MN1-00: LI0159
Entry
LI0159            CDS       T00354                                 
Symbol
glyA
Name
(GenBank) Glycine/serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
lip  Lawsonia intracellularis PHE/MN1-00
Pathway
lip00260  Glycine, serine and threonine metabolism
lip00630  Glyoxylate and dicarboxylate metabolism
lip00670  One carbon pool by folate
lip00680  Methane metabolism
lip01100  Metabolic pathways
lip01110  Biosynthesis of secondary metabolites
lip01120  Microbial metabolism in diverse environments
lip01200  Carbon metabolism
lip01230  Biosynthesis of amino acids
lip01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:lip00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LI0159 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    LI0159 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LI0159 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    LI0159 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LI0159 (glyA)
Enzymes [BR:lip01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     LI0159 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-ProteinID: CAJ54215
UniProt: Q1MS11
Position
complement(197926..199164)
AA seq 412 aa
MDQIILQDPELAQAIILESGRQIDKLELIASENIASTAVREAQSTILTNKYAEGYPGKRY
YGGCEYVDIAENLAIERAKALFHSEYANVQPHSGSQANMGAYFALIKPRDTILGMNLSHG
GHLTHGSPVNFSGRLFNIVSYGVNKETGLIDYEEVAKLAEKHKPQLIVAGASAYPRIIDF
SKFRSIADTIGAKLLVDMAHIAGLVATNLHPSPIPYAHITTTTTHKTLRGPRGGMILSTE
DMGKVINSQIFPGIQGGPLMHVIAAKAVALGEASKASFVTYQKQVILNAKTLAKQLLDAG
FNLVSGGTDNHLLLIDLTNKKITGKDAEKALDQAGITVNKNTVPFETLSPFVTSGIRIGT
PALTTRGLCEQDMIKVANWIVTALNNINNETQLKEINKEVTYFARQFPLFSW
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggatcaaataatacttcaagaccctgaattagcccaagcaattatcttagaaagtggc
cgacaaatagataagcttgaacttattgcatctgaaaatattgcttcaactgcagttcga
gaagcacaatcaacaattttaacaaataaatatgctgagggttatcctgggaagcgttat
tatggtggttgtgaatatgtcgacatagctgaaaatttagcgatagaacgtgctaaagca
ctttttcatagtgaatatgctaatgtccaaccccactctggaagtcaagctaatatggga
gcttattttgctctcattaagcctagggatacaatcttaggtatgaatttatctcatgga
ggacatttaactcatggaagtcctgtaaacttttcaggtcgactttttaatattgtatcg
tatggtgtcaacaaagagacaggacttattgactatgaagaagtagcaaagcttgcagaa
aaacataaaccacaactgattgtagctggagctagtgcttatccacgtattattgacttt
tctaaatttcgttcaattgctgatacaataggagcaaaacttcttgtagatatggcacat
attgctgggcttgtagctacaaacttacacccttctccaataccatacgcacatataaca
acaactactacacataaaacactacgtggtcctcgtggtggtatgattctttctacagaa
gatatggggaaggtaatcaatagccaaattttccctgggatacaaggtgggccacttatg
cacgttattgcagcaaaagcagtagcattaggagaagcttcaaaagctagctttgtaact
taccaaaaacaagtaatcttaaatgctaaaacccttgcaaaacaacttttggatgctggt
tttaaccttgtttctggaggaacagataatcatcttctattaattgacttaacaaataaa
aaaattacaggtaaagatgcagaaaaagctcttgatcaagctggcattactgtaaataaa
aatacagttccttttgaaacactttctccttttgtaacatctggtattcgtattggcaca
ccagctttaacaactcgaggtttatgtgaacaagatatgataaaggttgctaactggatt
gttactgctcttaataatatcaataacgaaactcaacttaaagaaataaataaagaagtt
acttattttgctcgtcaatttccactcttttcatggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (10)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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