KEGG   Listeria ivanovii WSLC3009: AX25_08160
Entry
AX25_08160        CDS       T03045                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
liw  Listeria ivanovii WSLC3009
Pathway
liw03030  DNA replication
liw03430  Mismatch repair
liw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:liw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AX25_08160
   03430 Mismatch repair
    AX25_08160
   03440 Homologous recombination
    AX25_08160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:liw03032]
    AX25_08160
   03400 DNA repair and recombination proteins [BR:liw03400]
    AX25_08160
Enzymes [BR:liw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AX25_08160
DNA replication proteins [BR:liw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AX25_08160
DNA repair and recombination proteins [BR:liw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AX25_08160
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 POT1 DUF655
Other DBs
NCBI-ProteinID: AHI56070
Position
complement(1647600..1650926)
AA seq 1108 aa
MGFVHLQVSSAYDLLSSTASIDSLVTKAKEYHYPALAITDKNVLYGAVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAEKTAGYHELLKIASAIQTREEGQELPQSWLRAYSS
DLIAISPGAKGEVERLLMEENQDGALEAYQNLVTIFGEDSVYLSLQKENPRLFAKIQTFC
AEENIRAVATKDVQYMEPKDAQAKGVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMERDWQ
TDFEKMACEETGKLADRCQVEIALDQHLLPRFPLKADQNAPEILRQTAYAGLAERELMAP
EYQERLDYELKVITEMGFADYFLIVWDVIRYSREAGILTGPGRGSAAGSLVSFALRITDV
DPIKYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLHKAIQENPRLENHIKSSKVNEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTREKPLTLADISLEDEKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDIVAVDALYRPGPMEQIDTFIARKHGKEAIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLQEERIHFVEGARSKGYSESSANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKANYPAAFMSSLLSSVFGNDDKIAQYITEAKNYGIRM
LAPSINHSNYYFQMESETSIRYSFRVIRKVPTKFVLEIINERKKAPFQDFFDFCERMPHK
MLSETVLEALVLSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQTKLQNLTITRLANISSGKTYQVAV
YVHEVKSIRTKKGETMCFMTISDDTKELSAVMFPESYRKYASLAQKGEILFLHVKADKRN
GELQLIVNQAEDLKEVKAPARLFIKLTEPVQMEQLRPILLQFKGESKVIIHQALTKQTTE
LKNIQVTPSNELQEALVELLGKENVVFK
NT seq 3327 nt   +upstreamnt  +downstreamnt
gtgggatttgttcatttacaagtttcgagcgcatatgatttactttcaagtacggcgtcg
attgattcgcttgtcactaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtgctttacggagcagttgagttttaccaaaaatgtttagcagcggacataaaa
ccaattattgggatgacagtaacaatacaaggttatttaaatcctattaattcctatgag
ttgatattaattgcggaaaagactgctggatatcatgagttacttaaaatcgctagtgcc
attcaaacgcgtgaagaaggacaagaacttccgcagagttggctacgagcttatagtagt
gatctcatcgcgatttcgccaggtgccaaaggggaagtagagcggttgcttatggaagaa
aatcaggatggggcattagaagcctaccaaaatttagtcactatttttggcgaggattct
gtttatttgtcgttacaaaaagaaaatccccgcctttttgcaaaaatccaaacgttttgt
gcggaagaaaacattcgtgcagtagcaacaaaggatgtacaatatatggaaccaaaagat
gcgcaagcgaaaggagtgttgacggccattcgagataatcgtacggttgattggacaaca
ctaccacttgcaggtcctaattactttacctcacaggaagaaatggagcgagattggcaa
accgactttgaaaaaatggcgtgtgaggaaactggcaaattagcagatcgatgccaagtg
gaaattgctttagaccaacatttattgccacgtttccccttgaaagctgaccaaaatgcg
ccggagattttacgacaaacggcctatgctggattagcagagcgtgaattaatggcgcca
gaatatcaagagcgtttggattatgagttaaaagtaatcacagaaatgggatttgcagat
tattttcttatcgtctgggatgttattcgttattctagagaggccgggattttaacaggt
cctggtcgtggctcggcagcgggatcgttagtttcttttgcgttaagaattaccgatgtt
gatccaattaaatataacttgttatttgagcgttttttaaatccagagcgaatcaccatg
ccagatattgacttggatttcccagataatcgtcgtgatgaagtaatttcttatgttgta
tcgaaatacggggaagcacatgtggcgcaaattggtacatttggtacacttgcagcaaaa
gccgcgattcgtgatacggcaaggagctttggtctgaattccgtgcttttatctgagtgg
tctaaacttatcccaagccaattagggattactttacacaaagcgattcaagaaaatccg
cggctagaaaaccatataaaaagttcgaaagtaaatgaaatgatatgggaagtagcctgt
cagctagaagggttaccgcgccatatttccacccatgcagctggaattgtcattagtgat
aaaccgcttgttgaacaagtcgctctgcaattaggtagcggcgatgcacgcttaactcag
tttgctatgggggaattagaaaaaattggcttacttaaaatggactttcttggacttaga
aatttaagtttacttgatcgtgtgttaaaatcggtcaattatacccgagaaaaaccacta
actttggcagatatttcactagaagatgaaaaaacgttaaaattattccaaactggggat
acaacaggtgttttccaatttgaatctgatggaattcgtcgcgtacttcggaagttaaaa
ccaacttcttttgaagatattgttgcagtagacgcgctttatcgcccaggcccaatggag
caaattgatacatttattgctagaaagcatggaaaagaagcaatacaatatccgcatcct
gatttggcgccgattttagaagtgacatatggcgttatcgtttatcaagaacaaattatt
caagttgctaatcaaatggctggattttcacttggcgaggcagatttattacgtcgcgca
gtaagtaagaaaaaagcagatgtgctacaggaagaacgcatccattttgtagaaggggcg
agaagtaaaggctattctgaaagtagcgccaatcaagtctatgatatgattgtgcaattt
gcaaattacggatttaaccggagtcatgccgctgcatattccaaaattgcctttcaatta
gcttaccttaaagcaaactatccagcagcgtttatgtcttccttactaagttctgttttc
ggaaatgacgataagattgcccaatatattaccgaagcaaaaaattatggtattcgtatg
ttagctccaagtattaatcatagtaattattatttccaaatggaaagcgaaacatctatc
cgctatagttttcgcgtcattcggaaagtaccaaccaagtttgttctcgaaattatcaac
gaacgaaaaaaagcgcctttccaagacttctttgatttttgtgaaagaatgccccataaa
atgttgtcagaaacggtattagaagcgttagtcttatccggatgttttgatgagtttgga
gaagaccgggcaactattttggcgacgattgatgcagtactgcaatacatttctcttctc
ggtgaagattctaaagggatgaatctttttgcagaagacgatgatttcttgaagaaaatg
aaaccacgttaccggaaaacagcacccatttcaatagatgaaaaattagaaaaagaaaaa
ctgtatacaggtcaatatgtatcggcgcatccagtatcatactatcaaacaaaattacaa
aatttgactattactagacttgcgaatattagttccggaaaaacgtatcaagtagctgtt
tatgtccatgaagtaaaatctattaggacaaaaaaaggcgaaaccatgtgctttatgaca
attagtgatgatacgaaagaattaagcgctgtgatgtttccagaaagctatcgcaagtat
gcatcacttgctcaaaaaggagaaattcttttcttacatgttaaagcggacaaaagaaac
ggagaacttcagctaattgtcaaccaagcagaagatttaaaagaagtgaaagctcctgcg
agactatttatcaaattaaccgaaccagtacaaatggaacaattaagacctattttgtta
caatttaaaggggagtcaaaggttattatccatcaagccttgactaagcaaacaaccgaa
ttaaaaaatattcaagttacaccgtcaaatgaattacaagaggcgctagtagagctcctt
gggaaagagaatgttgtttttaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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