KEGG   Lotus japonicus: Lj0g3v0057069.1
Entry
Lj0g3v0057069.1   CDS       T04348                                 
Symbol
Lj0g3v0057069.1
Name
(Kazusa) -
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj0g3v0057069.1 (Lj0g3v0057069.1)
   03041 Spliceosome [BR:lja03041]
    Lj0g3v0057069.1 (Lj0g3v0057069.1)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj0g3v0057069.1 (Lj0g3v0057069.1)
Enzymes [BR:lja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Lj0g3v0057069.1 (Lj0g3v0057069.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     Lj0g3v0057069.1 (Lj0g3v0057069.1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Lj0g3v0057069.1 (Lj0g3v0057069.1)
Spliceosome [BR:lja03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    Lj0g3v0057069.1 (Lj0g3v0057069.1)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    Lj0g3v0057069.1 (Lj0g3v0057069.1)
SSDB
Motif
Pfam: Helicase_C DEAD
AA seq 350 aa
MLDMGFEQQIRKIVQQMHMPPPGVRQTMLFSATFPTDIQKLAADFLSNYIFLAVGRVGSS
TELIVQKIELVQDTDKRNHLANLLCRQRANVDHGKQALTLIFVETKKGADALEIWLSRNG
FPAIAIHGDKVQMERERALRSFKRGFTPILVATDVASRGLDIPHVAHVINYDLPRDIADY
VHRIGRTGRAGKSGLATAFFSSNKNPPIAKALVEILQEAKQEVPAWLGQFAEGSSSGDRD
HGPPRRGRGNFGGRDFRNVTQPAVENYNNYYNTYGNADHYVEPYVTQPDTVYASNNHYDT
SYDYNNTNIPNSVYASSNHHYTDPNAEFCGAGRVENGPWGHASVVATGWD
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgttggacatgggttttgagcagcaaatacgcaagattgtgcagcagatgcacatgcct
cctccaggtgttagacaaacaatgcttttcagtgctacattccccactgatatacagaag
ctggctgcggattttctgtcaaactacatattcctggctgttggaagggttggttcgagc
actgaacttattgtacaaaaaattgaacttgtacaagatacagacaaacgaaaccatctt
gctaaccttctgtgtcgtcaaagggcaaatgtagaccatgggaagcaagccctaactctt
atctttgttgaaacaaagaaaggagctgatgctttagaaatttggttgtccagaaatggg
tttccagctattgcaatacatggtgataaagttcaaatggagcgggagcgagctttaaga
tctttcaaacgtggtttcactcccattttggtagcaactgatgttgcttcccggggttta
gatataccacatgtggctcatgttatcaactatgatttgcctagagacatagctgactat
gtacataggattggtagaacaggccgtgctggtaaatctggactagccactgcttttttc
agcagcaacaagaaccctcctattgcaaaggctcttgttgaaattttgcaggaagcaaag
caggaagttccggcttggctcggtcaatttgccgagggctcatcatctggtgatcgtgat
catggacctccgaggcgaggcagaggcaatttcggtggtcgtgatttccgtaatgtcact
caacctgctgtggagaattacaacaactactataatacttatggcaatgctgaccattat
gtggagccttatgtcactcagcctgatacagtttatgcgagcaataatcattatgatacc
tcttatgactacaacaacacaaacatccctaattctgtttatgcaagcagtaatcatcat
tatactgatcctaatgctgagttttgtggagctgggagggttgaaaatgggccttggggt
catgcatctgttgttgctactggatgggactagatt

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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