KEGG   Lotus japonicus: Lj2g3v2124840.2
Entry
Lj2g3v2124840.2   CDS       T04348                                 
Symbol
Lj2g3v2124840.2
Name
(Kazusa) -
  KO
K03538  ribonuclease P protein subunit POP4 [EC:3.1.26.5]
Organism
lja  Lotus japonicus
Pathway
lja03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Lj2g3v2124840.2 (Lj2g3v2124840.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lja03009]
    Lj2g3v2124840.2 (Lj2g3v2124840.2)
   03016 Transfer RNA biogenesis [BR:lja03016]
    Lj2g3v2124840.2 (Lj2g3v2124840.2)
   03029 Mitochondrial biogenesis [BR:lja03029]
    Lj2g3v2124840.2 (Lj2g3v2124840.2)
Enzymes [BR:lja01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     Lj2g3v2124840.2 (Lj2g3v2124840.2)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     Lj2g3v2124840.2 (Lj2g3v2124840.2)
Transfer RNA biogenesis [BR:lja03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    Lj2g3v2124840.2 (Lj2g3v2124840.2)
Mitochondrial biogenesis [BR:lja03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    Lj2g3v2124840.2 (Lj2g3v2124840.2)
SSDB
Motif
Pfam: RNase_P-MRP_p29
AA seq 298 aa
MAADSRKRTLEALERRIAVAKNDLLLKEKKSKKDIKDDGKPTIPAVSISNGSSLHCPSSD
ANKKGNISFYGHATSQDIEDGPAYDQLSLPINENLLTTNEEFSAERGGSIIGMLHELLQK
GDAAPKYMQGSKNMKIDNWILLDNFVQGRAVSSGSQTRALRIHSKRSKKHMSMKQHKKYG
SLDLPQEFHKFDIFKPMHEMWKDYIMQLLKSTGKNQLAQCLLVADLHGANILVVECKIKH
LTGTCGIMIRETSEAFGIITEDNKFRVVPKTVSVFVFQADCWKVTMHGDKLSSRKVGL
NT seq 900 nt   +upstreamnt  +downstreamnt
atggcggcagattcaagaaaacgcacattggaggctttggagagaagaattgctgttgcc
aaaaatgatcttctcttaaaagaaaagaagagcaaaaaagatataaaggatgatgggaaa
ccaaccattcccgcagtttctatttctaatggttcttccttacattgtccatcatcagat
gcaaacaagaaagggaatatcagtttttatggtcatgccacttcgcaagacattgaagat
ggtcctgcatatgatcaactttctctacctataaatgaaaatctgctgacaaccaatgaa
gagttttctgctgaaagaggaggttcaattattggaatgttgcacgagcttcttcagaag
ggagatgcagccccaaagtacatgcaaggatctaaaaacatgaaaattgacaactggatc
cttcttgataattttgtacaagggcgtgcagtttcttctggttctcaaacaagggctttg
cgaatccattcaaaacgctctaagaaacacatgtccatgaaacaacacaaaaagtatgga
tcattggatcttccgcaagaattccataagtttgatatcttcaagccaatgcatgaaatg
tggaaagactatataatgcagcttcttaaatccaccgggaaaaatcaattggctcaatgt
ctccttgttgcagatctacatggtgctaatattttagttgtggagtgtaaaatcaaacat
ttgactggaacttgtggcatcatgattcgtgaaacttctgaagcatttgggataattacc
gaagataataaatttcgagttgttcccaaaacggtttctgtatttgtattccaagctgat
tgctggaaagtcactatgcacggagataaactcagttcaagaaaggtcggattatgatat

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system