KEGG   Lotus japonicus: Lj2g3v2256250.1
Entry
Lj2g3v2256250.1   CDS       T04348                                 
Symbol
Lj2g3v2256250.1
Name
(Kazusa) -
  KO
K10140  DNA damage-binding protein 2
Organism
lja  Lotus japonicus
Pathway
lja03420  Nucleotide excision repair
lja04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Lj2g3v2256250.1 (Lj2g3v2256250.1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Lj2g3v2256250.1 (Lj2g3v2256250.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lja04121]
    Lj2g3v2256250.1 (Lj2g3v2256250.1)
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj2g3v2256250.1 (Lj2g3v2256250.1)
Ubiquitin system [BR:lja04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     Lj2g3v2256250.1 (Lj2g3v2256250.1)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      Lj2g3v2256250.1 (Lj2g3v2256250.1)
SSDB
Motif
Pfam: WD40
AA seq 370 aa
MAPVTRRVPFPKVVIERDTDSEQSSSEEEEEALEDDEEEALEHEQEEENGVAEIGKNEKL
EVGLDANRKGKTPITLPLRKVCKVCKKPGHESGFKGATYIDCPMKPCFLCKTPGHTTLTC
PHRFSTEHGVVPAPRKKTCKPFEYVFERQLRPGIPSIKPKYVIPDQVNCAVIRYHSRRIT
CLEFHPTKNNIILSGDKKGQLGVWDFVRVHEKVVYGNIHSCLLNNMKFNPTNDCMVYSAS
SDGTISFTDLETGISSSLMNLNPEGWQGPSTWKMLYGMDINSEKGLVLVADNFGFLHLLA
FGIYVEWKRDHPFMTLSTTVLLALHISLRYLGTKFLLHHLTTVFVYGILSLVKWTLLAEK
SYIVMTSIGI
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggctccagttactcgaagagtcccgtttccaaaggttgtcatcgagagagacactgat
tctgaacagagttcatccgaagaagaagaagaagcacttgaagatgatgaagaagaagca
cttgaacatgaacaagaagaagaaaatggggttgctgaaattggaaagaatgagaaactg
gaagtgggtttggacgcaaacaggaaagggaaaacaccaatcactctgcctctcagaaaa
gtttgcaaggtgtgtaagaagcctggacatgaatcaggcttcaagggtgctacgtatatt
gattgtccaatgaagccttgcttcctgtgtaaaactcctggacatactactttgacttgc
ccacatcggttcagtactgagcatggagttgttccggcgccccggaaaaaaacatgtaaa
ccttttgaatatgtgtttgaacgccagctaagaccaggcattccttcaatcaagcccaaa
tatgtgatcccagaccaagtgaattgtgctgtcatcagatatcacagcagacggataaca
tgcttggagtttcaccccacaaagaataacatcatattatcgggagacaagaaaggacaa
cttggagtttgggattttgttagggtgcatgagaaggtagtctacgggaacatacattct
tgtttactgaataacatgaagtttaatcctacaaatgattgtatggtctattctgcatcc
tcagatggaaccattagttttaccgacttagagactggaatatcatcctctctaatgaac
ctgaaccctgaaggatggcagggtccaagcacttggaagatgctctatggcatggatatt
aactctgagaaaggtcttgtacttgttgctgataactttggttttcttcacttgctcgcg
tttgggatatacgtcgaatggaaacgggatcatccatttatgaccttaagcacaaccgtg
ttgttagctctgcatatttctctccggtatctgggaacaaaattcttactacatcacttg
acaaccgtcttcgtgtatgggattctatctttggtaaaatggactctcctagccgagaaa
tcgtacatagtcatgacttcaatcggtatttgaccc

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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