KEGG   Lotus japonicus: Lj3g3v0323530.1
Entry
Lj3g3v0323530.1   CDS       T04348                                 
Symbol
Lj3g3v0323530.1
Name
(Kazusa) -
  KO
K03257  translation initiation factor 4A
Organism
lja  Lotus japonicus
Brite
KEGG Orthology (KO) [BR:lja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj3g3v0323530.1 (Lj3g3v0323530.1)
   03012 Translation factors [BR:lja03012]
    Lj3g3v0323530.1 (Lj3g3v0323530.1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    Lj3g3v0323530.1 (Lj3g3v0323530.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     Lj3g3v0323530.1 (Lj3g3v0323530.1)
   mRNA cycle factors
    Stress granule specific factors
     Lj3g3v0323530.1 (Lj3g3v0323530.1)
Translation factors [BR:lja03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    Lj3g3v0323530.1 (Lj3g3v0323530.1)
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Lj3g3v0323530.1 (Lj3g3v0323530.1)
  Exosomal proteins of bladder cancer cells
   Lj3g3v0323530.1 (Lj3g3v0323530.1)
SSDB
Motif
Pfam: DEAD ResIII Helicase_C AAA_22 AAA_19 Flavi_DEAD CMS1
AA seq 314 aa
MAGLAPEGSQFDAKQYDSKMTELLATDGQEFFTSYDEVYDTFDSMGLHENLLRGIYAYGF
ERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELVQCQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRP
DSIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SNDHTVSATHGDMD
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcaggtttagctccagaaggctcacagtttgatgcgaagcaatatgattccaagatg
actgaattgcttgctactgatggacaagaattcttcacctcatatgatgaagtctatgat
acttttgattcaatgggattgcatgaaaatctcctgagaggcatatatgcttatggtttt
gagagaccttctgcaatacagcagaggggaattgttcctttctgcaaaggtcttgatgtg
attcagcaggctcagtctggaactggaaagacagcaacattctgttctggaattctacaa
cagcttaattatgaattggttcagtgccaggctttggttttggcaccaacaagggagcta
gcacagcagattgagaaggtcatgcgagctctcggtgattatctcggtgtgaaggttcat
gcttgtgttggtgggacaagtgttcgtgaggatcagcgcatcctccaagctggagtccac
actgttgttggtactcctgggcgtgtgtttgacatgctgaggagacagtctcttcgccca
gatagcataaagatgtttgttttggatgaggctgatgaaatgctttcccgtggtttcaag
gatcagatttacgacatcttccagctactgccaggtaaaattcaggttggagtgttctct
gctacaatgccaccagaagccctggagattacaaggaagttcatgaataagccagtgaga
atcctggtcaagcgtgatgaattgactcttgaaggtatcaagcagttttatgtgaatgtt
gagaaggaagagtggaaactcgagacattatgcgacctgtatgagactcttgctatcact
cagagcgtcatttttgtgaacacaaggcgaaaggtcgactggctcactgacaagatgcga
agcaatgaccatacagtgtctgccacccacggagacatggac

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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