KEGG   Lotus japonicus: Lj3g3v2809850.1
Entry
Lj3g3v2809850.1   CDS       T04348                                 
Symbol
Lj3g3v2809850.1
Name
(Kazusa) -
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
lja  Lotus japonicus
Pathway
lja03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    Lj3g3v2809850.1 (Lj3g3v2809850.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lja04121]
    Lj3g3v2809850.1 (Lj3g3v2809850.1)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj3g3v2809850.1 (Lj3g3v2809850.1)
Enzymes [BR:lja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     Lj3g3v2809850.1 (Lj3g3v2809850.1)
Ubiquitin system [BR:lja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    Lj3g3v2809850.1 (Lj3g3v2809850.1)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     Lj3g3v2809850.1 (Lj3g3v2809850.1)
    Noncanonical PRC1 (PRC1.1)
     Lj3g3v2809850.1 (Lj3g3v2809850.1)
    Noncanonical PRC1 (PRC1.3/1.5)
     Lj3g3v2809850.1 (Lj3g3v2809850.1)
    Noncanonical PRC1 (PRC1.6)
     Lj3g3v2809850.1 (Lj3g3v2809850.1)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-Nse zf-RING_11 zf-C3HC4_5 zf-RING_6 zf-UDP zf-RING_10
AA seq 511 aa
MPAQKRSLPDSGDDGDTSPPLLYHNRHAKQPPHRNPHLKAHGGQQQEQDEEDDDEDQQEE
DEEEDDEEEDGEEEEEEEDEEDAEEDEDEAGQRHNHDEDQSQDSDESPSSDSEEKPEFVY
VPVQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS
LRDDPNYDALIASLYPDIEKYEEEELEFREEEKNRNKQIQASIAKIVQRQSEALVKRRRD
TPGAFAPRSQRNQRNIHSRRQNQVIDIQGSEDNEEENDNNEKDSSADDERCTEPPQRRRK
RWTRVRPSQPSSSMAGPDGGCVDSDIDVSRENRGTSRQVSKPRKLTWGRGGFRSNTRHGS
SGGSNSKSSRSGRLAKLVGHLRSLDENIDEFDVHLLLVSLDKSTPSLEQPHLCCRPTLTV
KHLYEYVARQTPLPVEAVEIMAVKGCCSTNRNESADDASALVCDELTTLAIDPHKDELEI
LQEHESLAEIRSKCISKRDHLILAYRQKEAL
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgccggcacagaagcgctccctgcctgactccggcgacgatggggacacttcgccgccg
ctcctctatcacaaccgccatgccaagcaaccaccgcaccgcaacccacacttgaaagcc
cacggcggtcagcagcaggagcaagacgaggaggacgatgatgaagaccagcaggaggag
gatgaggaggaagacgacgaagaggaggatggagaggaagaggaagaggaggaggatgag
gaggatgctgaagaagatgaagatgaagctgggcaacgccataatcacgacgaggatcaa
tcacaggattccgacgaatctccatcttctgactctgaagaaaaacctgaatttgtgtat
gtaccagttcaggatatccgtaaagatgtccaatgtccaatttgccttggtattattaag
aaaacgagaactgttatggaatgcttgcaccggttttgcagggagtgcattgacaaatcg
atgcgactagggaataatgaatgccctgcttgccgcacacactgtgccagtcgtcgctct
ttgagagatgatccaaactacgatgcccttattgcttctttatatccagacattgagaag
tatgaggaagaggagcttgaatttcgtgaagaggagaagaaccgcaataagcagattcaa
gcttctatagcaaaaatagttcaacggcaatctgaagcactggttaagaggcgtagagat
acaccaggtgcatttgcaccaagatcacagcgtaatcaacggaacattcattctaggaga
cagaaccaagtgattgatattcaaggatctgaagataatgaggaggaaaatgacaacaat
gaaaaagactcatctgctgatgatgagcggtgcacagaacccccgcagagaaggcgaaag
agatggaccagagttcgtccctctcagccatcatcatctatggcaggtcctgatggtgga
tgtgtagacagtgatatagatgtaagtagagaaaatcgaggaacttcaaggcaggtgtca
aaacctagaaagcttacttggggaaggggtggttttaggagtaacacccgacatggcagt
agtggtggtagcaatagcaaaagttcccgcagtggtcgattggctaagctggttggtcat
cttagaagcttggatgaaaatattgatgagtttgatgtccatctcttgcttgtttccctg
gacaaaagtactccaagtttggagcagccacacctttgctgtcgaccaactttgactgtc
aagcacctttacgaatatgttgcccgtcagacacctttgccagttgaagcagtagagata
atggcagttaaaggatgctgcagtacaaatcgcaacgagtcagctgatgatgcttcagcc
ctggtttgtgatgagctaacaacgctggctatagatcctcacaaagatgaactggaaatt
ttgcaagaacatgaatccctggctgagattagatccaagtgcatatctaaaagggatcat
ttgattctggcatacaggcaaaaggaggcattatagtct

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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