KEGG   Lotus japonicus: Lj4g3v1833610.1
Entry
Lj4g3v1833610.1   CDS       T04348                                 
Symbol
Lj4g3v1833610.1
Name
(Kazusa) -
  KO
K07936  GTP-binding nuclear protein Ran
Organism
lja  Lotus japonicus
Pathway
lja03008  Ribosome biogenesis in eukaryotes
lja03013  Nucleocytoplasmic transport
lja03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
   03008 Ribosome biogenesis in eukaryotes
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
   03009 Ribosome biogenesis [BR:lja03009]
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
   03016 Transfer RNA biogenesis [BR:lja03016]
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lja04147]
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
   04031 GTP-binding proteins [BR:lja04031]
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     Lj4g3v1833610.1 (Lj4g3v1833610.1)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
  Pre-60S particles
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
Transfer RNA biogenesis [BR:lja03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     Lj4g3v1833610.1 (Lj4g3v1833610.1)
   Spindle formation proteins
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
Exosome [BR:lja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Lj4g3v1833610.1 (Lj4g3v1833610.1)
GTP-binding proteins [BR:lja04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    Lj4g3v1833610.1 (Lj4g3v1833610.1)
SSDB
Motif
Pfam: Ras Roc
AA seq 129 aa
MFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE
ISAKSNYNFEKPFLYLAKKLAGDPGLHFVEMPALAPPDVVLDLTSQQMNEQELLIAANQP
LPDDDDEIF
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtttgatgtaacagcgaggttgacatacaagaatgttcctacttggcacagagatctc
tgcagggtgtgtgagaacataccaattgttctatgtggaaacaaggttgatgtcaagaac
agacaggttaaagcaaaacaggtcacattccacaggaagaagaatctgcagtactatgag
atctctgcaaagagtaactacaatttcgagaagcctttcttataccttgccaagaaactt
gcaggggatcctggtcttcactttgtggagatgcctgctcttgctcccccagatgttgtc
cttgatctaacttcacagcaaatgaatgaacaagaacttcttattgcggcaaatcagcct
cttcctgatgacgatgatgagatattttagaag

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