KEGG   Lotus japonicus: Lj5g3v0790850.1
Entry
Lj5g3v0790850.1   CDS       T04348                                 
Symbol
Lj5g3v0790850.1
Name
(Kazusa) -
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
lja  Lotus japonicus
Pathway
lja03010  Ribosome
lja04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Lj5g3v0790850.1 (Lj5g3v0790850.1)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Lj5g3v0790850.1 (Lj5g3v0790850.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lja03011]
    Lj5g3v0790850.1 (Lj5g3v0790850.1)
   04121 Ubiquitin system [BR:lja04121]
    Lj5g3v0790850.1 (Lj5g3v0790850.1)
Ribosome [BR:lja03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    Lj5g3v0790850.1 (Lj5g3v0790850.1)
  Archaea
    Lj5g3v0790850.1 (Lj5g3v0790850.1)
Ubiquitin system [BR:lja04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   Lj5g3v0790850.1 (Lj5g3v0790850.1)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_L40e Ubiquitin_2 DUF2604 Rad60-SLD_2 Dsc3_N TBK1_ULD
AA seq 102 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKNQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYAR
NT seq 306 nt   +upstreamnt  +downstreamnt
atgcagattttcgtgaaaaccctaactgggaaaaccatcactctcgaggtcgagagcagt
gacaccatcgacaatgtcaaggccaagaatcaagacaaggaaggcattccaccggatcag
cagcgtctcattttcgctgggaagcagcttgaagatggaagaaccttggctgattacaac
attcaaaaggaatccacgcttcatcttgtgctgagacttcgtgggggtatcattgagcct
tcattgatggctttggctcgcaaatacaatcaggacaagatgatctgccgcaaatgctat
gctcgt

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