KEGG   Lotus japonicus: Lj5g3v1351960.1
Entry
Lj5g3v1351960.1   CDS       T04348                                 
Symbol
Lj5g3v1351960.1
Name
(Kazusa) -
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lja  Lotus japonicus
Pathway
lja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Lj5g3v1351960.1 (Lj5g3v1351960.1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lja01009]
    Lj5g3v1351960.1 (Lj5g3v1351960.1)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj5g3v1351960.1 (Lj5g3v1351960.1)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj5g3v1351960.1 (Lj5g3v1351960.1)
Protein phosphatases and associated proteins [BR:lja01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     Lj5g3v1351960.1 (Lj5g3v1351960.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     Lj5g3v1351960.1 (Lj5g3v1351960.1)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     Lj5g3v1351960.1 (Lj5g3v1351960.1)
SSDB
Motif
Pfam: EF-hand_13 EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_5 EF-hand_8 DUF4187
AA seq 534 aa
MEVVTDAASLDVELLQLPEFSALALKSNFNFVEKLFEEWLSLPESNRLVTSLLNDAKSGA
PLNVPGNCSSPNAASSPLPSMFPAGTAPPLSPRSTSGSPRIVKQRAPSNLGSPLKVVSEP
IKEVIPQFYFQHGCPPPNELKEQCLFRIDQLFHDHLDGLQVHEFKSITKEVCKLPSFFST
SLFKKIDNGTGIVTRKAFIDYWINGNMLMKDTATQIYTILKQPQLNYLTQDDFKPVLREL
LATHPGLEFLQSTPEFQERYAETVVYRIYYYINRSGNGCLTLRELKRGNIIDAMQHADEE
EDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVAR
KFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEFWFNCIDLDGNGVLTRNELQFFYEEQLH
RMECMAQEPVLFEDILCQMIDMIGPEDENFITLRDLKGGKLSGSVFNILFNLNKFMAFET
RDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDVSNGSAEVWDESLESPF
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggaggtcgtcactgatgcggcgtcgttggacgtcgaattgttgcagctgccggagttt
tcagctttggctctcaagtctaacttcaatttcgttgagaagctttttgaggagtggttg
tcgcttcctgaaagcaatcgacttgtaacatcgttgttgaatgacgctaagtcaggtgct
cccttgaatgtcccagggaattgctctagtccaaatgctgcgagcagtcctttgccttcc
atgtttccggctggcactgctccacctctttctccaagaagtacatctggttcccctcgc
attgtgaaacaaagagctccttcaaatttgggctctcctttaaaagttgtcagtgagcca
attaaagaagtgatacctcagttctactttcaacatggatgtccacctccaaatgaattg
aaagaacaatgtttgttcagaattgatcagttatttcatgatcacttggatggcctgcag
gtgcatgaattcaagtcaatcactaaggaagtatgcaagctgccatcatttttttccact
tctcttttcaaaaagatcgacaatggaactggtattgtgacgaggaaagcatttattgat
tattggattaatggcaacatgttgatgaaggatacagctactcaaatatacacaatatta
aagcaaccacaactgaattaccttacacaggatgatttcaaacctgtcctacgtgagctt
ttagcaactcatccagggctggagttcctgcagagcacacctgagtttcaagagagatat
gctgaaactgtagtatacagaatctattattacattaatagatccggaaatggctgtctt
accttgagagagctgaagcgtggaaacataattgatgcaatgcagcatgccgatgaagaa
gaagacatcaacaaggttttgagatacttctcgtatgagcatttttatgttatatactgc
aagttttgggagctggatacagatcatgattttttgatagacaaggagaatctcatcaga
tatggtaaccacgcgcttacctatcgaattgttgatagaatattttctcaggtcgcaaga
aagtttaccagtaaggttgaggggaagatgggatatgaagactttgtttacttcatactg
tcagaggaggacaaatcatctgaaccaagtcttgagttttggtttaactgcatagatttg
gatggaaatggagttctgacaaggaacgaactgcaatttttttatgaggagcaattgcat
cggatggagtgcatggcccaagagcctgtgctttttgaggacatactgtgccagatgatt
gacatgattgggcctgaggatgaaaacttcataactctgcgtgacctaaaaggcggtaaa
ctttcaggaagtgtcttcaacatcctgttcaatctgaataagttcatggcctttgaaact
cgtgacccatttttgattcgtcaggaacgtgagaatccaacattgacagagtgggaccga
tttgctcatagagaatacattaggctttcaatggaagaagacgtagaagatgtctctaac
ggaagtgcagaagtctgggatgaatcactagagtctcccttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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