KEGG   Lotus japonicus: Lj6g3v2193670.1
Entry
Lj6g3v2193670.1   CDS       T04348                                 
Symbol
Lj6g3v2193670.1
Name
(Kazusa) -
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
lja  Lotus japonicus
Pathway
lja03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Lj6g3v2193670.1 (Lj6g3v2193670.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lja03009]
    Lj6g3v2193670.1 (Lj6g3v2193670.1)
   03032 DNA replication proteins [BR:lja03032]
    Lj6g3v2193670.1 (Lj6g3v2193670.1)
Ribosome biogenesis [BR:lja03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    Lj6g3v2193670.1 (Lj6g3v2193670.1)
 Prokaryotic type
    Lj6g3v2193670.1 (Lj6g3v2193670.1)
DNA replication proteins [BR:lja03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     Lj6g3v2193670.1 (Lj6g3v2193670.1)
SSDB
Motif
Pfam: DKCLD TruB_C_2 PUA TruB_N UPF0113
AA seq 584 aa
MSLSETKKKKHRSATKTHDGAATTEDDHHTKDEPQFMIKPEKLTPTIDTSQWPILLKNYD
RLNVRTGHYTPLPSGYSPLKRPLPEYLKYGVLNLDKPANPSSHEVVAWIKRLLRVEKTGH
SGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSDVPDVSKVARALETLTGAV
FQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLVLGVG
AHMQELRRVRSGIMGEKDNMVTMHDVIDAQWVFDNYRDESYLRRVVMPLEVLLTSYKRLV
VKDSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDH
GVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAAGKLDKHGKPNESTPQEWMRNLVLPA
GGDSMIAGLAAAAPEADEAKKGIAVEEGKKDGDGEGRKRKKHESTDSPASVPAKKVKVDV
VVDEGKVKVEVEGEKKEKKKKKKKDKENGEVASSDEEKAEKEKKKKHKVKVEDGSPDLDK
SEKKKKKKKDKDAEDNAAEISNGKEDSKSEKKHKKKKNKDAEEE
NT seq 1756 nt   +upstreamnt  +downstreamnt
atgtctctctccgagaccaagaagaagaagcaccgcagcgccaccaaaacccacgacgga
gccgccaccaccgaagatgaccaccacaccaaagacgaaccacagttcatgatcaaaccc
gagaagctcacacccaccatcgacacctcccagtggcccatcctcctcaaaaactacgac
cgcctcaacgtccgcaccggccactacacccctctcccctccggctactcccctctcaaa
cgccccctcccggagtatctcaaatacggcgtcctcaacctcgacaagcctgctaaccct
tcctcccatgaggtcgtcgcctggatcaaacgcctcctccgcgtcgagaaaaccggccac
agcggcactcttgaccccaaggtcaccgggaatctcattgtctgcattgacagggccacc
cgccttgtgaagtcgcagcagggtgctgggaaggagtatgtctgcattgcccgacttcac
tctgatgttcctgatgtttccaaggttgctcgcgccctcgagacgctcaccggtgctgtg
tttcaacgcccgccgttgatctctgctgtcaagcgccagctcaggatcaggaccatttat
gagagtaagcttcttgagtatgaccctgataggcatttggttgttttttggatttcatgt
gaggctggtacctatgttaggaccatgtgtgttcatttgggtttggttcttggcgttggt
gctcatatgcaagagcttaggagggttaggtctgggatcatgggtgagaaggataacatg
gttactatgcatgatgttattgatgctcagtgggtttttgataattatagggatgagagt
tatttgagaagggttgttatgcctttagaggttcttttaactagctataagaggttggtt
gtgaaggattctgctgtgaatgctatctgttatggtgccaagttgatgattcctggcttg
ctgaggtttgagaatgatattgaggcaggggaggaggttgtgcttatgaccaccaagggg
gaagctattgctcttgggattgctgagatgactactgctgtgatggcgacttgcgatcac
ggtgtggttgctaagatcaagagggtggtgatggatagagatacctatcccaggaagtgg
ggtttgggccctagggcttcaatgaagaagaagctgattgctgcggggaagctggataag
cacgggaagccgaatgagagcactccccaagagtggatgaggaatctggttttgcctgct
ggtggggatagcatgattgccggtttggctgctgctgctcctgaagctgatgaggcgaag
aaaggcattgctgtagaagagggtaagaaggatggagatggggaagggcgtaagaggaag
aaacatgaaagcactgatagccctgcttctgttccggctaagaaagtgaaagttgatgtg
gttgtagacgaagggaaagtaaaggtggaggttgagggtgagaagaaagagaagaagaag
aaaaagaagaaggacaaagagaatggtgaagtggcatcttcagatgaggagaaagctgaa
aaggagaagaaaaagaagcacaaggtaaaggttgaagatggttcaccagatttagacaag
tctgagaagaaaaagaagaagaagaaagacaaagatgctgaggataatgctgctgaaatt
agtaacggaaaggaggacagtaagagcgaaaagaagcataagaaaaagaaaaacaaggac
gcagaggaagaataaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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