KEGG   Lactobacillus jensenii: BUE77_04610
Entry
BUE77_04610       CDS       T04677                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lje  Lactobacillus jensenii
Brite
KEGG Orthology (KO) [BR:lje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lje03032]
    BUE77_04610
   03400 DNA repair and recombination proteins [BR:lje03400]
    BUE77_04610
Enzymes [BR:lje01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BUE77_04610
DNA replication proteins [BR:lje03032]
 Prokaryotic type
  DNA Topoisomerases
   BUE77_04610
DNA repair and recombination proteins [BR:lje03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BUE77_04610
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DUF2996 Zn_ribbon_recom HypA zf-GRF
Other DBs
NCBI-ProteinID: APT14728
Position
944346..946433
AA seq 695 aa
MPTRKKNLVIVESPAKAKTIEKYLGRSYHVIASKGHIRDLPKSQMGVDIEHDYQPKYISI
RGKGETIKELKKEAKKAKFVYLASDPDREGEAIAWHVAHILDLNDGQKHRVTFHEVTKDA
VKNAFKNPRTIDMDTVDAQQARRVLDRLVGYSLSPILWAKVKKGLSAGRVQSVALKLVLD
REQEIKDFKPEEYWTIDAEFIKGKKKFQASFYGLDGKKVELPNNEAVQSVLKKIDKKKPF
TVENVVKKERKRQAPAPFTTSTLQQEANKRLGFRTRRTMSIAQGLYEGISLGKEGTVGLI
TYMRTDSKRTSPVAQAEASKFLTETFGSEYASKSARHFKNQEDAQDAHEAIRPTSIYRTP
ESLKNSLTSEQYKLYKLIWSRFAASEMTPAVFDTVRADIVQNGVMYRTTGSKMKFAGFTK
VYDAGSDKSVELPDLAEGDSVKLSKQDNKQHFTMPPARYTEASLVRALEENGVGRPSTYA
PTIDTIQRRYYVKLEGRAIVPTELGEIVNNLVGKFFPDIVNVDFTAQLENDLDHVEEGKK
NWVKVVDEYYKPFSKELEKADSEIEKVQIKDEPAGFNCDICGAPMVIKMGRYGKFYACSR
FPDCRNTKAIVKEIGVICPKCGKGQIVEKKSKRGRKFFGCSNYPDCDFVSWDKPVGRDCP
NDGHFLVEKKTKKGPVVQCPNGDYKEEREENESSK
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgcctactagaaagaaaaatttagttattgtcgaatctcctgcaaaggcgaagacaatt
gaaaaatatcttggacgttcttaccatgtaattgcgtctaaaggacatattagagattta
cctaagtcacaaatgggggttgatattgaacatgattatcaacctaaatacatttccatt
cgtggtaaaggcgaaactattaaagaattaaaaaaagaagctaaaaaagcaaaatttgta
tatttagcatccgaccccgaccgtgaaggggaagcaattgcttggcacgttgctcatatt
ttagatttgaatgacggtcaaaagcatcgtgttacttttcacgaagttactaaggatgca
gtaaaaaacgcctttaaaaatccaagaacaattgatatggatactgttgatgcacagcag
gcacgtagggtcttggatcgacttgtaggttattctttaagtccgattttatgggctaag
gtgaaaaaaggcttatctgctggacgtgttcagtctgttgccttaaagcttgttttagat
cgagaacaagaaattaaagattttaaacctgaagaatactggactattgatgcagaattt
attaagggtaaaaagaagttccaggctagtttttacggcctagatggcaagaaggtagag
cttcctaataatgaggcagtgcaatcagttttaaagaagattgataaaaagaagcctttt
acagttgaaaatgtagtaaaaaaggaacgtaaacgtcaagcgccagctccatttactact
tctactttgcaacaagaagctaacaagcgtttagggtttagaaccagaaggacaatgtca
attgctcagggcctttatgaaggtataagcttgggtaaagaaggtacagttgggttaatt
acttatatgcgtaccgattccaaacgaacttcaccagtagctcaagcagaggcaagtaag
tttttaacagaaacatttggatctgaatatgcttcaaaaagtgctcgtcacttcaaaaat
caggaagatgctcaagatgcccacgaagcaattcgtccaacaagtatctatcgaactcct
gaatcacttaagaacagtctaactagtgagcaatacaaactttataagttaatttggtca
agatttgcagctagtgaaatgactccagctgtttttgatacagttcgtgctgatatcgtt
caaaatggagttatgtatcgtacaactggttctaagatgaaatttgctggatttactaag
gtttatgatgccggaagtgataagagtgtggaattgccagaccttgcagaaggtgatagt
gttaaactttctaagcaagacaataagcaacactttactatgcctcctgctcgttatact
gaagcaagtctagttcgtgcacttgaagaaaatggtgttggacggccgtcaacgtatgca
ccaacaattgatacaattcaaagacgttattatgttaagcttgaaggaagagcaattgta
ccaactgaattgggtgaaattgtaaataatttagttggcaagtttttcccagatattgtt
aacgttgactttacagctcaacttgaaaatgatcttgaccatgttgaagagggaaagaaa
aactgggttaaggttgttgatgaatactataagccattttctaaagaacttgaaaaagct
gatagtgaaattgaaaaagttcaaatcaaagatgaaccagctggctttaactgtgatatt
tgcggggcaccaatggttattaaaatgggacgttatggcaagttttatgcttgttcacgc
ttcccagattgtcgaaatactaaggcaatcgtcaaagagattggtgtaatttgtcctaaa
tgtggcaagggccaaattgtagagaaaaaatctaaacgtggacgtaaattctttggatgt
agtaattatcctgattgtgactttgtttcatgggataagccagtaggccgtgattgtcca
aatgatggccatttcttagtagaaaagaaaactaagaaaggacctgttgtacaatgtcca
aatggtgactataaagaagaacgtgaagaaaacgaaagttctaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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