KEGG   Lactobacillus johnsonii DPC 6026: LJP_0744
Entry
LJP_0744          CDS       T01960                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ljh03016]
    LJP_0744
Enzymes [BR:ljh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LJP_0744
Transfer RNA biogenesis [BR:ljh03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LJP_0744
 Prokaryotic type
    LJP_0744
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: AEB93072
Position
814423..815316
AA seq 297 aa
MLNGIVVVNKPRGVTSSDCVYKLRKILQIRKIGHAGTLDPEVNGVLPIAIGQATKLIELM
HEKPKSYIGSGMFGRATDSYDLDGTTTAEEKIVTPFTSDEIISGMKKLTGKIDQVPPIYS
AVRVNGKRLYEYARENIPVERPKRKVNIYSYELTQDPEYDPLEKTESFNFAIRCSKGTYV
RSLVNDLGEELRVPAVMTSLTRTSSSGFDLSQAVDLETIEKEIDYPEKWLQPIDSFFVDL
PQLQISPDQFKRVSNGAGIKLNTTYAKVALVYNGHIKAIYQRQGKIYRPEMMLLKNE
NT seq 894 nt   +upstreamnt  +downstreamnt
atgctaaatggaattgtagtagtaaataagccacgcggagtaaccagtagtgactgtgtt
tataaattacgaaaaattttacaaattagaaaaattggacatgcaggtacgttggatcca
gaagtaaatggggtattaccgattgcaattggccaagccacaaagctaattgaattgatg
catgaaaaaccaaagtcatatattggaagtggaatgtttgggagagcaactgatagctat
gatttagatggaacaaccactgcagaagaaaagatagttactccatttacaagtgatgaa
attattagtggaatgaaaaaacttactggaaagattgatcaagttcctccaatatattct
gcggtccgtgttaatggtaaaagactttatgaatatgctcgagaaaatattccagtagaa
cgtccgaaaagaaaagtaaacatttatagttatgaattaactcaagatccagaatatgat
ccactagaaaaaactgaaagttttaattttgctattcgctgttctaaaggaacctatgta
cgatccctagtaaatgatttgggagaggaattgagagttccagctgtaatgaccagtctt
actagaactagcagttcaggttttgatttaagtcaagcggtagatttagaaactattgaa
aaagaaatagattatcctgaaaaatggcttcaaccaattgatagttttttcgtagattta
ccccaacttcaaatatcaccagatcagtttaaaagagtttcaaatggagcaggcattaaa
ttgaacaccacttatgctaaggtggctttggtttataatggacatataaaagctatttat
caacgacaaggtaaaatttatcgtcctgaaatgatgcttttaaaaaatgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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