KEGG   Lactobacillus johnsonii DPC 6026: LJP_1447c
Entry
LJP_1447c         CDS       T01960                                 
Name
(GenBank) hypothetical protein
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ljh  Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:ljh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ljh03009]
    LJP_1447c
Enzymes [BR:ljh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LJP_1447c
Ribosome biogenesis [BR:ljh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LJP_1447c
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Cons_hypoth95 Methyltransf_15 Met_10 MTS RrnaAD DOT1 PrmA N6_N4_Mtase HMA
Other DBs
NCBI-ProteinID: AEB93769
Position
complement(1552393..1553745)
AA seq 450 aa
MQKNQIVDLEITDLSYEAMGVAHLDGMTVFVNNALPGEIVSAKLLKVKKNFAFAKIEKIK
KESPDRINVKLRQWVQTGLASLANIKYDKQLEFKRNQVVNLLHKADLDNVKVGQTMPSPE
ETGYRNKAQVPVREVNGKLDIGFFRKHSHDLVPLTSFFTTDPEIDRVLIKVRDILRKNHV
PAYDEIHNKGEVRYLEVRRSKATGEIMVILVCLHKDFPQLKEVTKEISEIKGVTSVVLNH
NPKKTNVILGKKDYLLWGEPQITDKIGDVSFKISPQSFFQINSLQTPRLYDLAIQKADLK
PDDVVIDAYSGIGTIGLSVAKHVKAVRGMEVIEPAVEDANANAKLNGITNAEYVVGKAEE
VMPRWAKEGLKTDVIFVDPPRKGLTPEFIDAAVETNPKKIVYISCNPATMVRDLQLFKEQ
GYDFDEIDPVDMFPQTPHVESVTVLERTEK
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcaaaaaaatcaaatagttgacttagaaattacagacttgtcttatgaagcaatgggg
gttgctcatctagatggaatgacggtttttgtaaataacgctcttccaggtgagattgtt
tctgccaaacttttaaaagtaaagaaaaattttgcttttgctaaaattgaaaaaattaaa
aaagagagtccagatcggattaacgtgaaacttcgccaatgggttcaaacggggctagca
tctcttgctaatattaaatatgataaacagcttgaatttaaacgtaatcaagttgttaat
ttactacataaagcagatttagataatgttaaagtaggtcaaacgatgcctagtccagaa
gaaacaggttatcggaataaggcacaagtgccagtacgtgaagttaatggcaagcttgat
attggattttttagaaaacattctcatgacttggtgccgttaactagcttctttactacg
gatccagagattgaccgagttttaattaaggtacgcgacattttgagaaagaatcatgtt
cctgcatatgatgagattcataataagggagaagttcgctatcttgaagttcgccgctct
aaagcaacgggcgaaattatggtgattttagtatgcttacataaagattttccacaatta
aaagaagttactaaagaaattagtgagatcaagggcgtaactagcgtagttttgaaccat
aatcctaaaaagacgaatgtgatcttaggtaaaaaagattacttgctttggggagaacca
caaattaccgataaaattggggatgttagtttcaaaatttctccacaaagtttctttcaa
attaattctcttcaaactccacgtttgtatgatttagctattcaaaaagctgatcttaag
ccggatgatgtcgtaatcgatgcttattctggtattggtaccattgggcttagtgtggct
aagcacgttaaggcagtgcgggggatggaagtcattgagcccgctgttgaagatgctaat
gccaatgctaaattaaatggcatcactaatgcagaatatgttgtaggtaaagcagaagaa
gtaatgccgcgctgggctaaagagggcttaaagactgatgtcatcttcgttgacccacct
agaaagggacttactccagaatttattgacgctgctgtagaaacaaatccgaagaagatt
gtttatatttcatgtaatccagcaactatggtgcgtgacttacaactcttcaaggaacaa
ggttatgactttgacgaaattgatccagttgatatgttcccgcaaactcctcatgtggag
agtgttactgtccttgagcgtacagaaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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