KEGG   Lactobacillus johnsonii N6.2: T285_00025
Entry
T285_00025        CDS       T02941                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ljn  Lactobacillus johnsonii N6.2
Brite
KEGG Orthology (KO) [BR:ljn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ljn03032]
    T285_00025 (gyrB)
   03400 DNA repair and recombination proteins [BR:ljn03400]
    T285_00025 (gyrB)
Enzymes [BR:ljn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     T285_00025 (gyrB)
DNA replication proteins [BR:ljn03032]
 Prokaryotic type
  DNA Topoisomerases
   T285_00025 (gyrB)
DNA repair and recombination proteins [BR:ljn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      T285_00025 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook
Other DBs
NCBI-ProteinID: AHA96504
UniProt: A0A7D9N423
Position
4235..6202
AA seq 655 aa
MAEDKSKAALNKAKDFEKRADTYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEI
IDNSIDERLAGFATKIEITVNEDGSVTVQDDGRGIPVDIQAKTGRPALETVFTVLHAGGK
FGGGGYKVSGGLHGVGASVVNALSTKLEVTVMRDGKKYAISFDHGRVVGEMKQVGTVPLE
EHGTIVHFYPDPDIFTETTTFDDKILKNRIRELAFLNKGLKLTFTDKRKESAETDVYHFE
GGIKEYVAFLNKGQEVLFDEPIYVEGNYEGIDVEVALQYTNGYKTTLMTFANNIHTYEGG
MHEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGITAVVSVKHPNPQFEGQTKTK
LGNSDARTAVDRAFSETFSRFLMENPSVGRKIVEKGQLAERARTAAKRAREVTRKKSGLE
IANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMD
RILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRP
MIEKGYVYIARPPLYQVRQGKVEKYLDTDEELHDYLGTLQPSPKPIVQRYKGLGEMDPEQ
LWETTMNPENRRLDRVSPEYAEDADKIFDLLMGNEVGPRREFIEKNAKYVENLDA
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggcagaagataagagcaaggcagcattaaataaagctaaagattttgaaaagcgtgct
gatacttataacgcaagtcaaattcaagttctaggcggacttgaagcagttagaaagcgc
ccaggtatgtacattggctcaactagtagccagggcttacaccaccttgtttgggaaatt
attgataatagtattgacgaacgattagcaggatttgcgaccaagattgaaattactgtt
aatgaagatggcagtgttacagtccaagatgatggacgtggtattccggttgatattcaa
gctaaaacaggtcgtccagccctagaaactgtatttactgttttgcacgctggtggtaaa
ttcggcggtggcggatataaagtatctggtggtcttcacggtgttggggcttctgtagta
aacgccctctcaactaaacttgaggttactgttatgagagatggaaagaaatatgccatt
tcttttgatcatggccgtgtagtaggagaaatgaagcaggtgggcacagttcctcttgaa
gaacatggaacaatcgttcatttctatcctgacccagatatttttacagagactacaact
ttcgacgataaaattttaaagaacagaattcgtgaacttgctttcttgaacaagggctta
aagttaacctttaccgataagcgtaaagaaagtgctgaaactgatgtttaccactttgaa
ggtggaatcaaagaatacgttgcctttttaaacaaaggtcaagaagtgttatttgatgag
ccaatctatgttgaaggtaattatgaaggtattgatgttgaagttgcattgcaatacacc
aatggctataaaactactttaatgacctttgcaaacaatattcacacctatgaaggtggg
atgcacgaagctggttttaagactgctctaactcgtgtagttaacgattatgctcataag
gctaaaatcttaaaagataaagatgacaacttatctggtgaggatattcgtgaaggaatt
acggcagttgtatcggttaagcaccctaatcctcagtttgaaggtcagactaagactaag
cttggaaactcagatgctagaactgcagtggaccgagcattttcagaaacgtttagtcgt
ttcttaatggaaaatccttctgttggtcgtaagattgttgaaaagggacaacttgctgaa
agagctagaactgctgctaagcgtgcacgtgaagttacccgtaagaaatcaggacttgaa
attgctaacttgccagggaaattagctgacaataccagtaatgacccaagtatttcagag
ttatttatcgttgagggtaactctgccggtggatctgcaaagcaaggacgttctcgttta
acccaggcaattttgccaattagaggtaagatcttgaacgttgaaaaggcatcaatggat
agaattcttgctaaccaagaaattagatccctctttaccgctttaggtacaggatttggt
gctgattttgacgtttcaaaggcaagataccataaattgatcatcatgacagatgccgat
gtcgatggtgctcacattagaactctgcttttgactcttttttacaactacatgcgtcca
atgatcgaaaaagggtatgtttatatcgctcgtccacctctatatcaagttcgccaaggt
aaggtagagaaatatctcgataccgacgaagaattgcatgattacttaggtaccttgcaa
ccaagtcctaaaccaattgttcaacgttataagggactaggagaaatggatccagaacaa
ctatgggaaactacaatgaatccagaaaatcgtcggttagatcgagtaagtcctgaatat
gcggaagatgctgacaagatatttgacctcttgatgggtaatgaagtaggtccaagacga
gaatttattgaaaagaacgctaaatacgttgaaaatttagatgcttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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