KEGG   Lactobacillus johnsonii NCC 533: LJ_0883
Entry
LJ_0883           CDS       T00158                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ljo  Lactobacillus johnsonii NCC 533
Pathway
ljo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ljo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LJ_0883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ljo03400]
    LJ_0883
Enzymes [BR:ljo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LJ_0883
DNA repair and recombination proteins [BR:ljo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LJ_0883
 Prokaryotic type
     LJ_0883
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AAS08704
UniProt: Q74K70
Position
787736..788431
AA seq 231 aa
MKKLIGNDWDEVLAPAFESEKYQELRDFLKEEYQTKQIFPDMYHIFTAFKLTSFADTKVV
ILGQDPYHNPGQATGMSFSVNPGVPLPPSLKNIYKELYDDVGAVPVNHGYLKKWADQGVL
LLNAVLTVPYGNANGHRGKGWELITDTAIKALSDRGKVVFILWGKFAQNKIPLIDEGKNV
IIKSPHPSPFSADRGFFGSRPFSRCNDALIKFGESPIDWQLPQEVNPADMA
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaaaaaattaattggaaatgattgggatgaagttttagcaccagcttttgaaagtgaa
aagtatcaagaattacgtgattttttaaaggaagaatatcaaacgaaacagatatttccc
gatatgtatcatatttttactgcttttaaattaacaagttttgcagatacgaaagttgta
attttaggacaagatccatatcataatccaggtcaagctactgggatgagctttagtgtt
aatccaggagtgccattgcctccatctttaaaaaatatttataaagaactatatgatgat
gtgggtgcagttccagtaaatcatggctaccttaaaaagtgggcagatcaaggagtatta
ctgttaaatgcagttttgactgtaccatatggaaatgctaatgggcaccgaggtaaagga
tgggaactaattacggacacagccattaaggcgctaagtgaccgaggaaaagttgtcttc
attttgtggggaaaatttgcacaaaataaaattcctttaattgatgagggaaagaatgta
attatcaaatctccccaccctagtcctttttcagcagatcgtggctttttcggttcacgt
ccgttttctagatgtaatgatgctttgattaaatttggtgaaagtccaattgattggcaa
ttaccacaagaagtaaacccagcagatatggcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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