KEGG   Lactobacillus johnsonii NCC 533: LJ_0886
Entry
LJ_0886           CDS       T00158                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ljo  Lactobacillus johnsonii NCC 533
Pathway
ljo03030  DNA replication
ljo03430  Mismatch repair
ljo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ljo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LJ_0886
   03430 Mismatch repair
    LJ_0886
   03440 Homologous recombination
    LJ_0886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ljo03032]
    LJ_0886
   03400 DNA repair and recombination proteins [BR:ljo03400]
    LJ_0886
Enzymes [BR:ljo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LJ_0886
DNA replication proteins [BR:ljo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LJ_0886
DNA repair and recombination proteins [BR:ljo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LJ_0886
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C DNA_pol_B_exo2
Other DBs
NCBI-ProteinID: AAS08707
UniProt: Q74K67
Position
complement(789977..790510)
AA seq 177 aa
MNFTAMDFETANSHPESACSLALVMVRNNEIVDRFYTVINPQMPFDGRNIKIHGITAEDV
KNAPTMAEVWPKIKKLYQPGMLVAAHNARFDCRVMEKSLARYNIPAPHYFAIDTLATSKA
FEPYLPNHKLDTVSEALNINLWHHHNALSDSEACAGILIEENKRVGDDPIKKMVKPI
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaactttactgcaatggattttgaaacggcaaacagtcatccggaaagtgcctgttct
cttgctttagttatggttagaaataatgaaattgtggatcgtttttatacagttatcaat
ccacaaatgccttttgatggaagaaatataaaaattcatggcattacagctgaagacgta
aaaaacgctccaacaatggctgaagtctggccaaaaataaaaaaattatatcaaccagga
atgttagtagctgcccataacgctcgctttgattgccgcgtaatggagaaatcgctggct
cgctataatattccggcaccccactactttgcaattgatactttagcaactagtaaagcc
tttgagccctatcttcctaatcacaaactagatacagtctcagaagctttaaatatcaat
ttatggcaccaccataatgctttaagcgatagcgaagcttgtgcaggtattttaattgag
gaaaataaacgtgttggagatgatccaatcaaaaaaatggttaagcctatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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