KEGG   Legionella jordanis: NCTC11533_00305
Entry
NCTC11533_00305   CDS       T06275                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ljr  Legionella jordanis
Pathway
ljr00300  Lysine biosynthesis
ljr00470  D-Amino acid metabolism
ljr01100  Metabolic pathways
ljr01110  Biosynthesis of secondary metabolites
ljr01120  Microbial metabolism in diverse environments
ljr01230  Biosynthesis of amino acids
Module
ljr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ljr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCTC11533_00305 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC11533_00305 (dapF)
Enzymes [BR:ljr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NCTC11533_00305 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: VEH11479
Position
1:complement(328583..329416)
AA seq 277 aa
MTIRFTKMHGLGNDFMVIDAVRQTINVDAADIANWAKRDTGIGFDQCLIVEPSPAPDSDF
FYRIFNANGQEVGQCGNGARCLARFLLHYDLTSKKQISVATRTTRMMLQINPDDSVTVDM
GTPKLAPPDIPLLAGQQATFYQLELANGLSYPVHALSVGNPHAVSVVEALDQLNLNQLGK
EISEHPLFPEQSNAGFMEIINKDQIRLRVYERGCGETKACGSGAVAAAAIARLYYQSSNL
IHVQLPGGELIIEWPDVNGPIFLKGPAEFVYEGVLLL
NT seq 834 nt   +upstreamnt  +downstreamnt
atgaccatccgatttacaaaaatgcatggattgggtaacgatttcatggtaattgacgcc
gtacgccagaccatcaatgtagatgctgcagacattgccaattgggcgaaaagagatacc
ggcatcggttttgaccaatgtcttattgttgaaccgagtccagcacccgatagcgatttt
ttttaccgcatcttcaatgccaatggccaagaagtcggccagtgcggcaatggcgctcgt
tgcctggcacgttttctcttgcactatgacttaacttcaaaaaagcagatatccgttgcc
actcgaacaactcgaatgatgttgcaaattaatcctgatgatagtgttaccgtggacatg
ggcactcccaagcttgctccgcctgacattcctttgcttgctggccaacaagctactttt
tatcagctggaattggcgaatgggttatcctaccctgtccatgcactcagtgtcggaaac
ccccatgcggttagcgtcgttgaagcacttgatcaactaaacctcaaccaattgggcaaa
gaaattagtgagcatccgctgtttcctgagcaaagtaatgccggttttatggagattatc
aataaagaccagatacgccttcgtgtatatgagcgaggctgcggcgaaaccaaagcttgc
ggcagcggcgctgttgcggctgcggccattgccaggctctattatcaatcttcaaacctc
attcacgtgcaattaccagggggagagttaatcattgaatggcccgatgtgaatggcccc
atttttctaaaagggcccgcggagtttgtctatgagggggtgttgctgttatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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