KEGG   Leptospira kmetyi: EFP84_16840
Entry
EFP84_16840       CDS       T05705                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
lkm  Leptospira kmetyi
Pathway
lkm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lkm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EFP84_16840 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lkm03021]
    EFP84_16840 (rho)
   03019 Messenger RNA biogenesis [BR:lkm03019]
    EFP84_16840 (rho)
Transcription machinery [BR:lkm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EFP84_16840 (rho)
Messenger RNA biogenesis [BR:lkm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EFP84_16840 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 NACHT AAA_25 OB_RNB AAA Spore_III_AA AAA_16
Other DBs
NCBI-ProteinID: AYV57004
UniProt: A0A2M9XVG0
Position
1:3578520..3579974
AA seq 484 aa
MATARRDNKNRHHHQNNNHNQNDSETTDSSIEEEGSGQESQDFDSSEGADQRARKRKRGG
YEGPTPAPIDLVELKKKAIADLIEVAKGLGVENTGGLKKQNLIFAILQAQAERDGQVHAA
GVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPSQIKLFGLRTGDTVEGQIRPPKESERFFA
MLRVETVNGYTPDVAGKRALFDNLTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRAL
IVAPPRTGKTILMQNIANAITSNHPECTLIVLLIDERPEEVTDMARHVRGEVVSSTFDEP
AQRHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSGGVDSNALH
KPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMEIHLDRKLSDKRIF
PAIDINKSGTRKEELLITKDVLQKVFVLRKVLSPMSITESMELLLEKMRLSKTNDAFLAS
MNTQ
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcaacagcaagacgagacaataagaacagacaccaccaccaaaataataaccacaac
caaaacgattccgaaacgaccgattcttccatcgaagaagaaggttccggtcaagaatcc
caggactttgattcctccgaaggtgcggatcaaagagcccgcaaacgcaaaaggggaggt
tacgaaggtcccactccggctcccatcgatctcgtcgaacttaagaaaaaggcaatcgcg
gatttaatcgaagtcgcaaaaggtctcggtgttgaaaacaccggcggcttaaaaaagcag
aatttaattttcgcaattcttcaagcgcaagccgaaagagacggccaggttcatgccgcg
ggcgttatggaaaaacttccggacggttacggctttttaagatcacccgactacaactac
gttccggggccggacgatatttacgtttctccttctcagatcaaactcttcggtttaaga
accggggatacggtggaaggtcaaatccgtcctccgaaagaatccgaaagattcttcgca
atgcttcgtgtggaaaccgtaaacggttatactcccgatgttgcgggtaaacgcgctctt
ttcgacaacttaactcctctttatccgaacgaaagacttaagatggaatacgatccttcc
atgctcgacacgagaattttggatcttatgtgtccgatcggaaagggtcaaagagctttg
atcgtggctcctccgagaaccggtaaaacgattctcatgcagaatatcgcaaacgcgatc
acttccaatcatccggaatgtactttgatcgttcttctgatcgacgaacgtccggaagaa
gttaccgatatggcgcgtcacgttcgtggagaagtcgtttcttccacattcgacgaaccg
gctcaaagacacgttcaagtcgccgagatggtcatcgaaaaggcgaaacgtctcgtagaa
cacggaaaagacgtcgttattcttttggattcgatcactcgtttggcgcgcgcgtataac
caggtgattcctacttccggtaaaattctttccggcggggtggattccaacgcgcttcac
aaaccgaaacgattcttcggagcggcgagaaatatcgaagaaggcggttccttgaccatc
atcgcgaccgctttgatcgacaccggttccaaaatggacgaggtgattttcgaggaattc
aaaggaaccggtaacatggaaatccatctcgatcggaaactttccgacaagcggattttc
ccggccatcgacatcaataagtcaggaactcgtaaggaagaacttttgatcaccaaggac
gtccttcagaaagtgtttgtccttcgaaaagtactttctcctatgagcatcacggaaagc
atggaattattgctggaaaaaatgcgtctttccaagacaaacgacgcctttttggccagc
atgaatacccaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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