KEGG   Apilactobacillus kunkeei: APS55_06495
Entry
APS55_06495       CDS       T04112                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
lku  Apilactobacillus kunkeei
Pathway
lku03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lku00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APS55_06495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lku03400]
    APS55_06495
Enzymes [BR:lku01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APS55_06495
DNA repair and recombination proteins [BR:lku03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     APS55_06495
SSDB
Motif
Pfam: PriA_C PriA_3primeBD ResIII DEAD Helicase_C PriA_CRR PIF1 AAA_30 AAA_19 SLFN-g3_helicase zinc-ribbons_6 zf-CHY AAA_11
Other DBs
NCBI-ProteinID: ALJ32146
Position
1382795..1385173
AA seq 792 aa
MQTNEPYTYLVPDELNDKLQKGMRVIVPFGNGGRKIQGIVWDIDNNGTFDGELKEISGLL
DLDSVLNTELLDMSKWMAEKTYSFQISCILTMLPSVMRAKYQKQLVLNDSSEIDDDILAI
FGDDTVVDFDVDEYPAAVLKKIIQYRKENKLSVEYKVSDGAKAKKIYAIKPNLTTEQAKE
ELTHVRKNSKNLIKILDFIINHNDKEIAQRKLVHDFDIPEAAIKSAVDKGWFTRFLQEEY
RNPYQGKVGTNKPLQLNDDQQSAVDRISAATKHNQDTVFLLEGVTGSGKTEVYLQSIQKA
LELGKTALMLVPEISLTPQMVKRVKGRFGNRVAMLHSGLSNGEKYDEWRRVNNGEADVVV
GARSAIFAPLDNIGIIIMDEEHEASYKQDDSPRYHTRDVAKWRASFHNCPLVLGSATPSL
ESRARATKGVYQLIKLPHRINNQSLPEVRVIDMKEEVKNSGQEDFSSELLSAINNRLQKH
EQIVLMLNRRGYSSFVMCRSCGFVLHCPNCDISLTLHMDSRTMKCHYCGHEEPIPNKCKN
CGSKKIRYYGTGTQKVQEKLQSLVPNARILRMDVDTTRRKGSHERILQRFGNGEADILLG
TQMIAKGLDFPNVTLVGVLNADTSLDLPDFRSSERTFNLLTQVSGRAGRAEKKGLVYIQT
FNPDHYAIRLAQRQDYELFYRKEMNVRHQTNYPPYFFTVKISASDVNEAKAAAKMYEIAK
ILKAKLSDQAIMLGPSPSSILKLKNKYYYQIIIKYKNEPNMKPCLEYILNHYQKDAQKGL
YVNIDPDPLNFM
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgcaaactaacgaaccatatacttacttagtgccagatgagctaaacgataaacttcaa
aaagggatgcgtgtcattgttccgtttggaaatggtggccgtaaaattcagggaatcgtt
tgggatatcgacaataatggaacttttgacggtgaattaaaggaaatttcaggactattg
gatttggattcggtattgaatactgaattactggacatgtctaaatggatggcagaaaag
acctattcctttcaaattagttgtattttaacaatgctcccaagcgtaatgagagcgaag
tatcaaaaacaactagtattaaatgattcaagtgaaatcgacgacgatattttagccatt
tttggtgatgatactgtcgttgattttgacgtggatgaatacccagcagcagtattaaag
aagattattcaatatcgtaaagaaaacaaactttctgttgaatacaaggtttcagatggt
gccaaggctaaaaagatttatgccattaaaccgaacttaacaactgagcaagcaaaagaa
gagttaactcatgtccgtaagaactcaaagaacctgattaaaattctagattttatcatc
aaccataatgataaagagattgctcaacgtaagttggttcatgactttgatattcctgaa
gctgcgattaaaagtgcggtggataagggatggtttactaggttcttacaagaggaatac
cgtaacccataccaaggtaaagttggcacaaacaaaccattacagttaaacgacgatcaa
caaagtgccgtcgatagaattagtgcagcaaccaagcacaatcaggatactgtcttttta
ttagagggtgttacgggttctggaaagactgaagtatatcttcaatcaatccaaaaagca
cttgagttaggcaagactgctttaatgttggtccctgaaatttcgttaactcctcagatg
gtaaaaagagttaagggtcgatttgggaatcgagtagcgatgttacatagtggtttgtca
aatggtgaaaagtacgatgaatggcgcagagttaacaatggtgaagctgacgtggtcgtt
ggagcacgttctgccatctttgctccgctagataatatcggtatcatcatcatggatgaa
gaacatgaagctagttataagcaagatgattcgcctcgataccatacaagagacgttgct
aagtggcgagcaagttttcacaactgtccgttagttttaggtagtgccactccttcattg
gaatcaagagcaagagctactaagggcgtatatcaactaatcaaacttccacacagaatc
aataaccaatccttacctgaggttagggttattgacatgaaggaagaggttaaaaatagc
ggtcaagaagatttttcatctgaattgctatcagcgattaacaatcgtttacaaaaacac
gaacagattgtgttgatgttaaaccgcaggggatactcatcatttgtgatgtgtcgtagt
tgtggtttcgtattgcattgtccaaactgtgatatctcacttacgctacacatggattca
agaacgatgaagtgtcactactgtggtcacgaggaaccaattcctaacaagtgtaaaaac
tgtggtagtaaaaagatcagatactacggtactggaactcaaaaggtccaagaaaaactt
caatcattagtacccaatgctcgcatcttaagaatggatgttgataccacaagaagaaaa
ggttcacacgaacgcatcttacaaaggtttggtaacggtgaagccgacatcttacttgga
actcaaatgattgcgaagggtttggactttcctaacgttacacttgtcggtgttttgaat
gccgacacttcccttgatttacctgatttccgttctagtgaaagaacatttaacttgtta
actcaggtgagtggacgtgctggtcgtgcagagaaaaaaggattggtttatattcaaacc
tttaatccggatcactatgcaattaggctagcgcaaagacaggactatgaattgttctat
cgtaaggaaatgaatgttagacatcaaactaactatccaccttactttttcactgttaag
atatcagcttccgatgtcaacgaagctaaggcagctgctaagatgtacgaaattgctaag
attttaaaggcgaagctaagtgaccaagcgattatgttaggaccatcacctagttcaatc
ttaaaattaaagaataagtactactatcaaattattattaagtataaaaacgaaccaaat
atgaagccatgtttggaatatatattaaaccattatcaaaaggatgctcaaaagggacta
tatgtaaacatagaccctgatcctttgaactttatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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