KEGG   Lactococcus lactis subsp. cremoris SK11: LACR_2375
Entry
LACR_2375         CDS       T00420                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
llc  Lactococcus lactis subsp. cremoris SK11
Pathway
llc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:llc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LACR_2375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llc03021]
    LACR_2375
   03400 DNA repair and recombination proteins [BR:llc03400]
    LACR_2375
Enzymes [BR:llc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LACR_2375
Transcription machinery [BR:llc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LACR_2375
DNA repair and recombination proteins [BR:llc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LACR_2375
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 RAD51D_N
Other DBs
NCBI-ProteinID: ABJ73821
UniProt: Q02W51
Position
complement(2215689..2216627)
AA seq 312 aa
MIEFEKPKITKFDESENYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIQIEGVQ
HEFATIPGVREDVIQIVLAVKGIAIKSYVESEKQIELDVTGPMDVTAGDILTDSDIEIVN
KDHYLFSIAEGHSMRAVMTVKKGYGYVPADENKVDGAPIGTIAVDSIYTPVSKVNYQVEP
ARVGGDSSYDKLTLEITTNGTIVSDEALSLSAKILTDHLNLFVDLSEVAAEAETLVVKDE
VKTERVLDKIIEEMDFSVRAYNGLKRAGINTVTDIVEMSEADMIKVKNLGHKSVEEVKVK
LTELGLSLKKRK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaaaaattactaaatttgacgaatcagaaaattacggtaaa
ttcgttgttgaaccacttgaacgtggttatggtacaactttaggtaactctctgcgtcgc
gtccttttgtcatcacttcctggtgctgctgtgacttcaattcaaattgaaggtgttcaa
cacgaattcgcaacaatccctggcgtacgtgaagatgtcatccaaatcgttcttgcggtt
aaaggaattgccatcaaatcatacgttgaatctgaaaaacaaatcgaacttgacgttact
ggtcctatggatgttactgctggtgatatcttaactgatagcgacattgaaattgtcaac
aaagaccattacttgttctctattgctgaaggtcactcaatgcgtgctgtaatgactgtt
aaaaaaggatacggctatgttccggctgacgaaaataaagtcgatggagcgccaattggc
acaattgctgtagactcaatttacacaccagtaagtaaagtaaattatcaagttgaacct
gcccgtgttggtggagattctagctacgataaattaacacttgaaattactacaaacggt
actatcgtttctgacgaagctttgtcactctcagctaaaatcttgacagaccacttgaac
ttgttcgttgatctttcagaagttgcagctgaagctgaaacacttgttgttaaagatgaa
gttaaaacagaacgtgtgctcgataaaattattgaagaaatggacttctcagttcgtgct
tacaatggtttgaaacgtgcaggtatcaacactgttactgatattgttgaaatgagcgaa
gctgacatgattaaagtcaaaaacctcggtcacaaatcagtagaagaagtcaaagttaaa
ttgactgaattgggactttcccttaaaaaaagaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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