KEGG   Lactococcus lactis subsp. cremoris NZ9000: LLNZ_01935
Entry
LLNZ_01935        CDS       T02131                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
lln  Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LLNZ_01935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lln03019]
    LLNZ_01935
   03009 Ribosome biogenesis [BR:lln03009]
    LLNZ_01935
Enzymes [BR:lln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LLNZ_01935
Messenger RNA biogenesis [BR:lln03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LLNZ_01935
Ribosome biogenesis [BR:lln03009]
 Prokaryotic type
  rRNA helicases
   LLNZ_01935
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: ADJ59389
Position
361169..362824
AA seq 551 aa
MKFSELGLSEGIVKTLTEIGYEQPTPIQEETIKLALEGRDVLGQAQTGTGKTAAFGLPTI
EKINAENPAIQALVIAPTRELAVQGQEELFRFGKSKGLKVRTVFGGSSIEKQIKGLKAGA
HIVVGTPGRLVDLIKRKAIKLDQLETLILDEADEMLNMGFLEDIHFIIEKTPENRQTLLF
SATMPADIKKIGVKFMKNPEHIKIAAKEMTADRIDQYFVKTKEFEKFDVLTRLLDVERPE
LAIVFGRTKRRVDELIRGLKLRGYRAEGMHGDLDQNKRLAVLRDFKAGHIDVLVATDVAA
RGLDVSGVTHVYNYDITQDQESYVHRIGRTGRAGKSGRSVTFVSYNEMGYLRAIEKLTNK
EMKGLKPPTKEEAYQASLSVAMDDVLRDLSDESGKAKLAKFDKQAASLLEKFDAKELVAL
LLQGRVKDPDNQEEVKITAERPLPYNGEGKGFKKKGKGGGGRYKGRGNGDRDGNRDGNRG
GYRGNRDSKDGERGGDRKRNWKDRDDNRGGYREKRDDRRFDDRKQGEKTPRKRTTGTEKS
AGFVMRSRGDK
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgaaatttagtgaactcggcctgtcagaaggaatcgtaaaaacacttacagagattggt
tatgaacaacctacaccaatccaagaagaaacaattaaattggcgcttgaaggacgtgac
gttcttggtcaagcgcaaacagggactggtaaaacagcggcatttggtcttcctactatt
gagaaaatcaatgctgaaaatccagccattcaagcacttgttattgctccaacccgtgaa
cttgcagttcaaggacaagaagaacttttccgttttggtaaatcaaaaggacttaaagtt
cgtactgtattcggtggttcaagtattgaaaaacaaatcaaaggacttaaagctggcgca
catatcgttgtgggaacaccaggtcgtttggttgacttgattaaacgtaaagcaatcaaa
cttgaccaacttgaaactttgattcttgatgaagcagatgaaatgcttaacatgggattt
ttggaagacattcattttattattgaaaaaacaccagaaaatcgtcaaacattgcttttc
tcagcaacaatgcctgctgatatcaaaaaaattggtgtgaaattcatgaagaatcctgaa
cacatcaaaattgcagccaaagaaatgactgctgaccgtattgaccaatactttgtgaaa
acaaaagaatttgaaaaatttgatgttttgactcgtttgcttgatgttgaacgtccagaa
cttgccattgttttcggtcgtacaaaacgccgcgttgacgaattgattcgtggtcttaaa
ttacgcggatatcgtgctgaaggaatgcacggagatttggatcaaaacaaacgtttggcc
gttttacgtgatttcaaagctggacatattgatgtcttggttgctactgacgttgccgct
cgtgggcttgacgtatcaggtgtaacacacgtttacaactacgatattacccaagaccaa
gaaagctatgttcaccgtatcggacgtacaggtcgtgctggtaaatcaggccgctcagta
acttttgtttcatacaatgaaatgggctaccttcgtgccattgaaaaattgacaaacaaa
gaaatgaaaggcttgaaaccaccaacaaaagaagaagcttaccaagcgtcactttctgtt
gcgatggatgatgttcttcgtgatttgtctgatgaatcaggtaaagcaaaattagcaaaa
tttgacaaacaagcagcaagcttacttgaaaaatttgatgctaaagaattggttgcctta
cttctccaaggacgtgttaaagaccctgataaccaagaagaagttaaaattacagccgaa
cgtccattaccatacaatggtgaaggaaaaggattcaagaaaaaaggtaaaggtggcggc
ggacgctacaaaggccgtggaaatggcgaccgtgatggtaatcgtgacggaaaccgtgga
ggctaccgtggtaatcgtgattctaaagatggcgaacgcggtggagatcgtaaacgtaac
tggaaagaccgtgatgacaatcgtggaggttaccgtgaaaaacgtgatgatcgtcgcttt
gacgaccgtaaacaaggtgaaaaaactcctcgtaaacgtaccacaggaactgaaaaatca
gctggcttcgtaatgcgtagccgtggcgataaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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