KEGG   Lactococcus lactis subsp. cremoris A76: llh_6565
Entry
llh_6565          CDS       T01965                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
llr  Lactococcus lactis subsp. cremoris A76
Brite
KEGG Orthology (KO) [BR:llr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llr03032]
    llh_6565
   03400 DNA repair and recombination proteins [BR:llr03400]
    llh_6565
Enzymes [BR:llr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     llh_6565
DNA replication proteins [BR:llr03032]
 Prokaryotic type
  DNA Topoisomerases
   llh_6565
DNA repair and recombination proteins [BR:llr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      llh_6565
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF2996 DUF5091 C1_2
Other DBs
NCBI-ProteinID: AEU40489
UniProt: G8P305
Position
complement(1219138..1221264)
AA seq 708 aa
MPTSTKTKTSTKKKTTRKKVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLKK
STMSVDIENDYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHILN
LPLEEKNRVVFNEITKDAVKNAFKEPRQIDVDLVDAQQARRVLDRLVGYSISPILWKKVK
KGLSAGRVQSIALKLIVDRENEINAFIPEEYWSIDGEFKKGTKKFKASFWGIDGKKHPLK
NNEDVIKVMERLDGPDFNVDKVEKKERRRNSPLPYTTSSMQQDAANKLKFRTRKTMMVAQ
QLYEGLTLGSQGHQGLITYMRTDSTRISPVAQSAAHSYIAEQFGEKYSKHGSKVKNASGA
QDAHEAIRPSNVFNTPESIAKYLDKDQLKLYTLIWNRFVASQMVAAIFDTVKVNLSQNGV
IFIANGSQVKFDGYLRIYNDSDKSNMLPEMEENETVKKANVKPEQHFTQPPARYSEATLI
KTLEENGVGRPSTYAPTLETIQKRYYVRLSAKRFEPTELGEIVNKLIVEFFPNIVNTEFT
AEMEKDLDQVEEGKRQWIEVVDQFYKPFAKELENAEEGMEKIQIKDEPAGFDCDVCGSPM
VIKLGRFGKFYACSNFPDCRNTKAIVKEIGVKCPLCHEGNIIERKTKKNRIFYGCDRYPE
CEFTSWDKPIGRDCPKSGHFLVEKKVRGGGKQVVCSNDECDYQEEKQK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgccaacttcaactaaaactaaaactagtacaaagaaaaaaacaacacgaaagaaagtg
actcctgggaaaaatctcgtaattgtcgaatcgcctgctaaagccaaaacaattgaaaaa
tatcttggacgaaactataaagttgttgcttctgtcggtcatattcgtgatttaaaaaaa
tcaacgatgtctgttgatatcgagaatgattatgaaccacaatatatcaatattcgaggt
aaggcacctctaatcaactcactcaaaaaagaagccaaagctgccaaagctgtctatctc
gcgagtgacccggaccgtgaaggagaagcaatttcatggcacttagctcacatcttgaat
cttccactcgaagaaaaaaaccgtgtggtcttcaacgaaattactaaagacgccgtaaaa
aacgcctttaaggaaccacgtcaaattgatgtagatttggttgatgcccaacaagcacgt
cgcgttcttgaccgcctagttggatattcaatcagtccaattctttggaaaaaggtcaaa
aaaggactttctgcaggtcgagttcaatcgattgctttaaaattaatcgttgaccgcgaa
aatgaaattaatgcctttatcccagaagaatactggtcaattgatggggaattcaaaaaa
ggaaccaagaaatttaaagcttcattttggggaattgatggaaaaaaacatccattaaaa
aataacgaagatgttattaaagtgatggagcgtttagacggtcctgatttcaatgtcgat
aaagttgaaaagaaagaacgtcgtagaaattcaccactcccttatacaacaagttcaatg
caacaagatgcagcaaataagcttaaatttcgtacccgtaaaacaatgatggttgcccaa
cagctttatgaaggattgacactcggaagtcaaggacatcaaggtctgattacctatatg
cgtaccgactcaacacgtatttctccagtcgcacaaagtgcagctcatagctatattgcg
gaacaatttggcgaaaagtacagcaagcacggttcaaaagttaagaatgcctctggtgct
caagatgcccacgaagccattcgaccttcaaatgtctttaatacacctgagtccattgct
aaatatttggacaaagaccaattaaaactctatacacttatttggaatcgttttgttgct
agccaaatggttgcagccatttttgatactgtgaaagtgaacctttcacaaaatggtgtc
atttttatcgccaatggttcacaggtcaaattcgacggttatcttagaatctacaacgac
tccgataaatcaaatatgcttccagaaatggaagaaaacgagacagtgaaaaaagcaaat
gttaaaccagaacaacacttcacacaaccaccggctcgatattctgaagcaacactcatt
aaaacattagaagaaaacggtgtaggccgtccctcaacctatgctccaaccttagaaaca
attcaaaaacgctattatgtaagattatcagcaaaacgatttgaacctacggaacttgga
gaaatcgttaacaagttgattgttgaatttttccctaacattgttaataccgaattcact
gccgaaatggaaaaagatcttgatcaggttgaagaaggaaaacgccaatggattgaggtt
gttgaccaattctacaaaccttttgctaaagaacttgaaaatgctgaagaaggtatggag
aagattcaaatcaaggatgaacccgctggttttgattgtgatgtgtgtggaagtccaatg
gtcattaaattaggacgtttcggtaagttttatgcttgtagtaacttcccagattgccga
aataccaaggctatcgtgaaagaaattggcgtaaaatgtccactttgtcatgaaggaaac
atcattgaacgtaaaactaagaaaaatagaattttctatggttgtgaccgctatcctgaa
tgtgaatttacaagctgggacaaaccaattggacgtgattgtcctaaatctggtcatttt
ctcgttgaaaagaaagttcgtggtggtggtaaacaagtcgtgtgttcaaatgacgagtgt
gactatcaagaagaaaaacaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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