KEGG   Labilithrix luteola: AKJ09_00645
Entry
AKJ09_00645       CDS       T04033                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
llu  Labilithrix luteola
Pathway
llu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:llu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AKJ09_00645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llu03021]
    AKJ09_00645
   03400 DNA repair and recombination proteins [BR:llu03400]
    AKJ09_00645
Enzymes [BR:llu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AKJ09_00645
Transcription machinery [BR:llu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AKJ09_00645
DNA repair and recombination proteins [BR:llu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AKJ09_00645
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45
Other DBs
NCBI-ProteinID: AKU93981
UniProt: A0A0K1PKQ8
Position
complement(621096..625229)
AA seq 1377 aa
MATAIQSNFRVRKNLGRIQRVIEVPNLIDIQKSSYDKFLQSNVPQNERQETGLQAVFRSV
FPIKDFNGTSELVFVSYNLEKPKYDVDECRQRGMTFAAPIKVTTQLMIYDTRDGGERIVR
DIKEQEVYFGEIPLMTETGTFIINGTERVVVSQLHRSPGVFFDHDKGKTHSSGKLLYSAR
VIPYRGSWLDFEFDPKDIIYVRIDRRRKMHATVLLRALGYSTQDLLNYFYNTETIYIEKG
GKYSKSVEYDLLAGQRATRDIKVGNEVIVKKNSKFMKATMKKLKEAKIDRLSADPEELAG
KVAAHDVVDKETGEVILEVNEEVTADKLEKLREAGINEFKILFIDGLNVGSYLRDTLLAE
KVKTTEDAIMEIYRRLRPGDPPTLDTARTLFQNLFFNPERYDLSKVGRLKLNYKFYRDVP
EEQRPPIDTQVLTAQDILETVRHLIELKNGRGSVDDIDHLGNRRVRAVGELMENQYRIGL
VRMERAIKERMSMSQEIDTLMPHDLINAKPVSAVVKEYFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTFARVNEYGFV
ETPYRRAGEGSVTQDVQWYSALEEEAKYIAQASVGVDEKGKFKDSLVSARLNGDYQMVAP
DMIQLMDVAPNQMVSVAAALVPFLEHDDANRALMGANMQRQAVPLIRSWAPLVGTGMEGK
LARDSGVCVLARRDGFIESVDANRIVIRPDSDKAEIPDIYHLYKFQRSNQSTCFNQKPIV
RAGERVKAGDVLADGPSTDMGELALGQNVMVAFMPWQGYNFEDSILVSERIAKDDVYTSI
HIEEFECVARDTKLGKEEVTRDIPNVGEEALKDLDESGIVRIGAEVKPGDILVGKITPKG
ETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVGGIVINARIFARKGTEKDERSKDIEDH
ERIRLEKQRDEEVKILRDSFFRGLKKKLAGQTTTGKLVDDKGKVLLQKGQVLDEAALDEI
PHKYWSELPVVDADDIAGKMRELEEIISVREEQLRDKIDRLSKGDELPPGVIKMVKVYIA
IKRKLQVGDKMAGRHGNKGVVSRIMAEEDMPYTQEGRPVDIVLNPLGVPSRMNIGQILEV
HLGWGAQSLGWQLNSMLEHNATDAQLKEHIVKVFEGDKDVSKIVSKLTGEEARQVAQKLK
KGVHYASPVFDGAPEEAIKSSLALANLPSSGQAVLFDGRTGEAFDQEVTVGVMYFLKLHH
LVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGTAYALQEFLTVKSDD
VMGRTRMYEAIVKGEYTLEPGLPESFNVLIKELQALCLNVELLEPGQVRAADQAAEE
NT seq 4134 nt   +upstreamnt  +downstreamnt
atggcgaccgctatccagtccaacttccgcgtccgtaagaacctgggacggatccaacgt
gtcatcgaggtccccaacctcatcgacatccagaaatcctcgtacgacaagttcctgcag
tccaacgtcccgcagaacgagcggcaagagacgggtctgcaagcggtcttccgtagcgtc
ttcccgatcaaagatttcaacgggacgagcgagctcgtcttcgtgtcgtacaacctcgag
aagccgaagtacgacgtggacgagtgccgccagcgcggcatgacgttcgccgcgccgatc
aaggtgacgacccagctgatgatctacgacacccgcgatggcggggagcgtatcgtccgc
gacatcaaggagcaggaggtctacttcggcgagatcccgctcatgacggagaccggtacc
ttcatcatcaacggtaccgagcgcgtcgtcgtcagccagctccaccgaagcccgggcgtc
ttcttcgaccacgacaagggcaagacccactcgagcggcaagctcctctactcggctcgc
gtcatcccgtaccgcggctcgtggctcgacttcgagttcgacccgaaggacatcatctac
gtccgcatcgaccgccgccggaagatgcacgcgacggtgctcctgcgcgcgctcggctac
agcacgcaggacctcctcaactacttctacaacaccgagaccatctacatcgagaagggt
ggcaagtactcgaagtccgtcgagtacgaccttcttgctggtcagcgtgcgacccgcgac
atcaaggtcggcaacgaagtcatcgtcaagaagaactccaagttcatgaaggcgacgatg
aagaagctgaaggaggcgaagatcgatcgcctctcggccgatcccgaggagctcgcgggt
aaggtcgcggctcacgacgtcgtcgacaaggagaccggtgaagtcatcctcgaggtcaac
gaggaggtcaccgcggacaagctcgagaagctccgcgaagcgggcatcaacgagttcaag
atcctcttcatcgatggtctcaacgtcggcagctacctccgcgacacgcttctcgcggag
aaggtgaagaccacggaagacgcgatcatggagatctaccggcgcctccgccccggtgat
ccgccgacgctcgacaccgcgcgtacgctcttccagaacctgttcttcaaccccgagcgc
tacgacctctcgaaggtcggtcgcctcaagctgaactacaagttctaccgcgacgtcccc
gaggagcagcgcccgccgatcgatacgcaggtgctcacggctcaggacatcctggagacc
gtccgccacctcatcgagctgaagaacggtcgcggctcggtcgacgacatcgaccacctc
ggtaaccgtcgcgtgcgcgccgtcggcgagctcatggagaaccagtaccgcatcggtttg
gttcgtatggagcgcgccatcaaggagcgcatgagcatgtcgcaagagatcgacacgctc
atgccgcacgacctcatcaacgcgaagcccgtctccgccgttgtgaaggagtacttcggc
agctcgcagctctcgcagttcatggaccagaccaacccgctctccgaggtcacgcacaag
cgtcgtctctcggcgctcggacctggcggtctcacgcgtgagcgcgcgggcttcgaagtc
cgcgacgttcacccgacccactacggtcgtatctgcccgatcgagacgccggaaggtccg
aacatcggcctcatcgcgtcgctctcgacgttcgcccgcgtcaacgagtacggcttcgtc
gagacgccgtaccgccgcgccggcgaaggcagcgtcacgcaggacgtgcagtggtactcg
gcgctcgaggaagaggcgaagtacatcgcccaggcctcggtcggcgtcgacgagaagggc
aagttcaaggacagcctcgtgtccgcccgtctcaacggtgactaccagatggtcgcgccc
gacatgatccagctcatggacgtcgcgccgaatcagatggtgtccgtcgctgcggccctc
gttccgttcctcgagcacgacgacgcgaaccgcgcactcatgggcgcgaacatgcagcgt
caggccgttccgctcatccgtagctgggcgccgctcgtcggcaccggcatggaaggcaag
ctcgcgcgtgactccggcgtgtgcgtcctcgcgcgccgcgacggcttcatcgagagcgtc
gacgcgaaccgtatcgtcatccgcccggactcggacaaggccgagatcccggacatctac
cacctctacaagttccagcgctcgaaccagtcgacctgcttcaaccagaagccgatcgtc
cgagccggtgaacgcgtgaaggctggcgacgtcctcgcggacggcccgtcgaccgacatg
ggcgagctcgcgctcggtcagaacgtgatggtcgcgttcatgccgtggcagggctacaac
ttcgaagactcgatcctcgtcagcgagcgcatcgcgaaggatgacgtctacacctcgatc
cacatcgaggagttcgagtgcgtcgcccgcgacacgaagctcggcaaggaagaagtcacc
cgcgacatcccgaacgtcggcgaagaggccctcaaggacctcgacgagagcggcatcgtc
cgcatcggcgccgaggtgaagccgggcgacatcctcgtcggcaagatcacgccgaagggg
gagacccagctctcgcccgaagagaagctgctccgcgcgatcttcggcgagaaggccggc
gacgtccgcgacagctcgctccgcgtccccccgggcgtcggcggcatcgtcatcaacgcc
cgcatcttcgcccgcaagggaacggagaaggacgagcgttcgaaggacatcgaggaccac
gagcgcatccgcctcgagaagcagcgtgacgaggaggtcaagatcctccgcgactcgttc
ttccgcggcctcaagaagaagctcgccggtcagacgaccacgggcaagctggtcgacgac
aagggcaaggtccttctccagaagggtcaggtcctcgacgaggctgctctcgacgagatc
ccgcacaagtactggagcgagctccccgtcgtcgacgcggacgacatcgccgggaagatg
cgcgagctcgaagagatcatcagcgtccgcgaggagcagctccgcgacaagatcgatcgc
ctctccaagggcgacgagcttccgccgggcgtgatcaagatggtgaaggtctacatcgcc
atcaagcgcaagctccaggtcggcgacaagatggcaggccgccacggtaacaagggcgtc
gtctcgcgcatcatggccgaagaggacatgccctacacgcaggagggccgtccggtcgac
atcgtcctcaacccgctcggcgttcctagccgtatgaacatcggccagatcctcgaggtt
cacctcggttggggcgctcagtcgcttggctggcagctcaacagcatgctcgagcacaac
gcgacggacgcgcagctcaaggagcacatcgtcaaggtcttcgaaggcgacaaggacgtc
tcgaagatcgtgtcgaagctcacgggcgaagaggctcgtcaggtcgcgcagaagttgaag
aagggcgtgcactacgcgtcgccggtcttcgacggtgcacctgaagaggcgatcaagagc
tcgctcgcgctcgccaacctgccctcgagcggccaggcggttctcttcgacggccgtacc
ggtgaagcgttcgaccaggaggtcacggtgggagtcatgtacttcctcaagctgcaccac
ctcgtcgacgacaagatccacgcgcgttcgatcggtccgtactcgctcgtcacccagcag
ccgctcggtggcaaggcgcagttcggcggccagcgcctcggcgaaatggaagtctgggcg
atggaggcctacggaacggcctacgcgctccaggagttcctcacggtcaagagcgacgac
gtcatgggtcgtacccgcatgtacgaagccatcgtcaagggcgagtacacgcttgagccg
ggtcttccggagtcgttcaacgtcctcatcaaggagcttcaggcgctctgcttgaacgtc
gagctcctcgagccgggacaggtccgcgccgccgaccaggcagcggaggagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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