KEGG   Lactococcus cremoris subsp. cremoris KW2: kw2_0398
Entry
kw2_0398          CDS       T02848                                 
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit HolB
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
llw  Lactococcus cremoris subsp. cremoris KW2
Pathway
llw03030  DNA replication
llw03430  Mismatch repair
llw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:llw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    kw2_0398 (holB)
   03430 Mismatch repair
    kw2_0398 (holB)
   03440 Homologous recombination
    kw2_0398 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llw03032]
    kw2_0398 (holB)
   03400 DNA repair and recombination proteins [BR:llw03400]
    kw2_0398 (holB)
Enzymes [BR:llw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     kw2_0398 (holB)
DNA replication proteins [BR:llw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     kw2_0398 (holB)
DNA repair and recombination proteins [BR:llw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     kw2_0398 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 Mannitol_dh pAdhesive_11 Pilus_CpaD DUF643 Vps39_1
Other DBs
NCBI-ProteinID: AGV72381
Position
398403..399263
AA seq 286 aa
MEIVDIQPQLYKQFSTILQHGKLSHAYLFSGGFGSFELAIWLSQALFCENPENSLPCGYC
RSCRLVAQQEFADLHIVEPDGQTIKTAQIRDLTQVFSESGYEGKQQVLLIREAEKMHPNA
ANALLKSIEEPETEIVVFLLTDNENMILQTIKSRTQIINFRKNVQFLQDFLEKNGILKTQ
AELLAEICNSTDRALELAQQSWFNEGLQRIQHFVKLLKKSADEAFLYLKDLVEIFDDKEK
QNQAFELLLQLFNQERMSQELLKTFQAIKMWKSNVRFESSLTFIVL
NT seq 861 nt   +upstreamnt  +downstreamnt
gtggaaatagtagatattcagcctcaactttataagcaattttcaacaattttgcaacat
ggaaaattaagccatgcttatttattttcaggtggatttggttcttttgaattagcaatt
tggttgagccaagccctattttgtgagaatcctgagaattctcttccttgtgggtattgt
cgctcttgtcgtctggttgctcaacaggaatttgccgatttgcacatcgttgaaccggat
ggacagacgataaaaaccgcacaaattcgtgatttgacacaggtttttagtgaatctggt
tatgaaggaaaacagcaagttttgttaattagggaagcagaaaaaatgcatcctaatgcg
gcaaatgctctattgaaatctattgaagaacctgagacagaaattgttgtttttttactg
acagataatgagaacatgattttgcaaacgataaaatcacggacacagattattaatttc
cggaaaaacgttcaatttttacaagattttcttgaaaaaaatggaattttaaaaacgcaa
gcagaactcctagctgaaatttgtaattctactgacagagctttagaattggcccaacaa
agttggttcaatgaaggacttcagagaattcaacattttgttaaacttctaaaaaaatca
gctgacgaggcctttttatacttgaaagatttggttgaaatttttgatgataaagaaaag
caaaatcaagcttttgaacttttattgcaactatttaatcaagaaagaatgagtcaagaa
cttctaaaaacctttcaggcaattaaaatgtggaaaagtaatgttcgatttgagtcaagt
ttaacttttattgttctgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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