KEGG   Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_0458
Entry
NCDO2118_0458     CDS       T03437                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
llx  Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03030  DNA replication
llx03430  Mismatch repair
llx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:llx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCDO2118_0458 (holB)
   03430 Mismatch repair
    NCDO2118_0458 (holB)
   03440 Homologous recombination
    NCDO2118_0458 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llx03032]
    NCDO2118_0458 (holB)
   03400 DNA repair and recombination proteins [BR:llx03400]
    NCDO2118_0458 (holB)
Enzymes [BR:llx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCDO2118_0458 (holB)
DNA replication proteins [BR:llx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCDO2118_0458 (holB)
DNA repair and recombination proteins [BR:llx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCDO2118_0458 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Mannitol_dh Pilus_CpaD pAdhesive_11 Vps39_1 Fib_alpha
Other DBs
NCBI-ProteinID: AII11956
Position
449000..449860
AA seq 286 aa
MEIKDIQPQLYKQFSTILQHGKLSHAYLFSGGFGSFELAIWLSQALFCENPENSLPCGHC
RSCRLVAQQEFTDLHIVEPDGQTIKTAQIRELTQVFNESGYEGKQQVILIKEAEKMHPNA
ANALLKSIEEPETEIVVFLLTDNENMILQTIKSRTQIINFPKNVQYLQDFLEKNGILKTQ
AELLAEICNSTDKALELAQQSWFNEGLQRLQQFVKLLKTSADEAFLYLKELVEIFDDKEK
QNQAFELLLQLFNQERMSQELLKTFQAIKMWKSNVRFESSLTFLVL
NT seq 861 nt   +upstreamnt  +downstreamnt
gtggaaataaaagatattcagcctcaactttataagcagttctcaactattttgcaacat
ggaaaattaagtcatgcttatttattttcagggggatttggttcttttgaattagcaatc
tggctgagtcaagccttattttgtgagaatcctgaaaattctttgccttgtggacattgt
cgttcttgtcgtcttgttgcccaacaagaatttaccgacttacatatcgttgaacctgat
ggacaaacgattaaaacagcacaaattcgggaactgacacaggttttcaatgaatctggt
tatgagggaaaacaacaggtgattttaattaaggaagctgaaaaaatgcatcctaatgca
gcaaatgctctattgaaatcaattgaagaaccagaaacagaaattgttgtttttttactg
acagacaatgaaaatatgattttacaaacaataaaatcacggacacaaattattaatttt
ccaaaaaatgttcaatacttacaagattttttggaaaagaatggtattttaaaaacacaa
gcagaacttcttgcggaaatctgtaattcgactgacaaagcattagaattagctcagcag
agctggtttaacgaagggcttcaaagacttcaacaatttgtaaaacttctaaaaacatct
gctgacgaggcgttcttgtatttgaaagaattagtcgaaatttttgatgacaaagaaaaa
caaaatcaagcgtttgaacttttattacaactttttaatcaagaaagaatgagtcaggaa
cttttaaaaacatttcaggcaataaaaatgtggaaaagcaatgtccgatttgagtcaagt
ttaacttttcttgttttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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