KEGG   Leishmania major: LMJF_11_0530
Entry
LMJF_11_0530      CDS       T01014                                 
Name
(RefSeq) hypothetical protein
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
lma  Leishmania major
Brite
KEGG Orthology (KO) [BR:lma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lma03016]
    LMJF_11_0530
Enzymes [BR:lma01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LMJF_11_0530
Transfer RNA biogenesis [BR:lma03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LMJF_11_0530
SSDB
Motif
Pfam: Pus10_C
Other DBs
NCBI-GeneID: 5649802
NCBI-ProteinID: XP_001681521
UniProt: Q4QH27
Position
11:183172..185334
AA seq 720 aa
MSAAAATAASGRTAWPKDALCYQCALRMSMLFDYPPPRAMGQLPSSLASGAVSALSDDTL
PTLDDDHHPLFTLVHETPRSARRYFRGALQPTVTTADGLQAPRSVDAPEVVGPTAAASTA
HGMLGGDTAPKYAVSWLCVACMGLYQFIDLIHAPLAAAAVRASPFYDSEAITINVNINRS
FTFTWLAVATRYFDLKGTGTERPSPSSVVKEELSNFKDFYMSDLRARILPYLLYSHDDVA
ASSVSPAAISRTTQLPGLAVYVDAVGATLPDHAREVGKEATAGEPVVKCARTEVTAVVSG
SASSSRAAAPDRGGTRPALVALQAFRYSGASESLVGEVFCRHHATEGLITDGHMPAAYCG
NRSTEVLPYSVIYDYAVPYLTKAGWMPATATAAREEGQEGCRTTARQAATVSCRLHHTNI
YLMGSYRKMMRNMSQSPWFLNGQRIGSFSLQEVIANPVLPFFFPDMPGLPPEAAESPALP
ASDEGESTSAAPLAVERGAHATRWQAVTPSVASSTLVFGYNRYKFHSAGREDVDVRMLGE
GRPFVLEFVSPIRERFTEDDLRRLEASICSSYEGSVEVRQLRRTDADITVRLARHSESKV
KRYRCVIWSSRAIDDVATDPRVRTIHAMRDLPIQQKTPLRVLHRRSLHRRPRLIHSMRLT
PLNTHWFLLDLETQAGTYVKEFVHGDMGRTTPHLGMLLNARTDIIQLDVVGMAMHDLDQE
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgtctgctgccgccgcgactgcggcatctggccgcactgcctggccgaaagatgcccta
tgctaccagtgtgctcttcgaatgtcaatgctgttcgattaccctcctccacgagcgatg
gggcagcttccgtcctctctcgcatcaggagccgtctctgccctttccgacgatacactg
ccgacgctggacgatgaccaccatccactgttcactctcgtccatgagactcctcggagt
gcgcgtcgctactttcgcggcgccctacaaccgactgtcactacagcagacggtctgcaa
gcgccacgttcagttgacgcacctgaagtggtggggcccacagctgcagcttccacggcg
catggtatgcttggcggtgatactgctcccaaatacgcagtatcgtggctgtgcgttgcg
tgcatgggactgtaccagttcatcgacctcattcatgcccctttggcggcggctgcagtg
cgagcaagcccgttttacgattctgaggccatcaccatcaacgtgaacattaaccgcagc
ttcacgttcacgtggctggctgtggcgacccgctacttcgacctcaaaggaacaggcacg
gaaagaccgtcgccgtcgtcggttgtgaaggaggagctgagcaatttcaaggacttttac
atgagcgacttgcgtgcacgcattcttccctatctgttgtactcgcatgacgatgtagcg
gcctcaagcgtgtcgccggcagccatctcgagaaccacgcagcttcctgggctcgccgtg
tatgtcgacgccgttggggcgacgctgccagatcatgcgagggaggtggggaaggaggcc
actgcaggagagcccgtcgtcaagtgcgcacgaaccgaggtgactgccgttgtttctggg
tcggcaagctcttctagggcggctgctccagatcgaggtggaaccaggcctgctctcgtc
gccctgcaagcgttccgctacagcggggcaagcgagagcctcgtgggagaagtgttttgt
cgtcatcacgctacggagggcctcatcaccgatgggcacatgcccgctgcgtactgcgga
aaccgctctaccgaggtgcttccgtacagcgtcatctacgactacgcagtgccgtatctt
accaaggctggatggatgccggcgacagcgacggccgcgagagaagaaggccaagagggt
tgtcgaacgactgcccggcaggcagccacggtctcctgccgactgcatcacacgaacatc
tacctcatgggaagctatcgcaaaatgatgcgcaacatgtcacagtctccgtggtttctg
aatggacagcgcatcggctcattctctctccaggaggtcatcgcaaacccggtgctgcct
ttcttctttccggatatgcctgggctgcctcccgaggcagcggagtcgccggcgttgccc
gccagcgacgaaggggaatcgacatcagctgcacccctggcggtagagcgcggcgcccac
gccacacgctggcaggctgtcaccccgtccgtcgcctcatccaccctcgtcttcggctac
aatcgctacaagtttcacagcgccggccgcgaggatgtggatgtgcggatgctcggtgaa
gggcggccgtttgtgctggagttcgtttcgccgatccgtgagcgcttcaccgaggacgat
ttgcgccgcctcgaggcctccatttgctccagctacgagggcagcgtagaagtgcgtcag
ctgcgacgcacagatgcggacatcaccgtccgcctcgcccgtcattcggagagcaaggtg
aagcggtatcgctgcgtcatctggtctagccgcgccatcgacgacgtggctaccgatccc
cgtgtgcgtaccattcacgctatgagggacttgccgatccagcagaagacgcccctgcgt
gtgctgcaccgacgctcgctgcatcggcggccgcggctgattcactcgatgaggctgacg
cctctcaacacgcattggttcctgctcgatctcgaaactcaggctggaacctatgtgaag
gagtttgtgcacggtgatatgggccgcacgacaccgcacttgggcatgctgctgaatgcc
cgcacggacatcattcagttggatgtcgttgggatggccatgcacgacctcgaccaagaa
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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