KEGG   Leishmania major: LMJF_22_1580
Entry
LMJF_22_1580      CDS       T01014                                 
Name
(RefSeq) putative exosome complex exonuclease RRP45
  KO
K03678  exosome complex component RRP45
Organism
lma  Leishmania major
Pathway
lma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMJF_22_1580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lma03019]
    LMJF_22_1580
Messenger RNA biogenesis [BR:lma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LMJF_22_1580
SSDB
Motif
Pfam: RNase_PH RNase_PH_C TEX13
Other DBs
NCBI-GeneID: 5651931
NCBI-ProteinID: XP_001683309
UniProt: Q4QBI9
Position
22:642735..643826
AA seq 363 aa
MLYRTAVPVPADALVQRNLEFTRTAWKAGLRPDQRDANQLRVVEIDFPLLSRDVVQVKCG
NTVATATISCDLVEPSPYRPKHGFFEVHARQLLNERDPLDQSKEIKRISMYLTRLLSGSV
LETESLCVIPGRRVWSIDAEVIIVNNDGNAQDVAQWAVMTALQHVRRPELTIRGEDVIVH
PPHERDPVPLPLHHIPLSFTFAVCANPQEVQLAVRAATLRSAHAPRAGASSGANADEGDG
EAEELGWSSDALQVVVDPSLEEATAAACTVSVALNGEGHVCSLEKADGCYVSIAYLEQCM
EIATKLTQALLSQMKESMEAHNAKRTEAVRSQFLWAQQRHGIQAIATPGDEGEHARKSAK
TEK
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgctttaccgcacggcagtaccagtgccggctgacgcgcttgtgcagcgcaatctggag
ttcacgcggaccgcgtggaaggcaggcctccgtcccgatcaacgagatgcgaatcagctg
cgggtggtggagatagacttcccgctgctctcccgtgacgtggtgcaggtcaagtgcggc
aacaccgtcgccacggccaccatcagctgcgaccttgtagagccctccccgtatcgtcca
aagcacggcttcttcgaggtgcatgcccgccagctgctgaacgaacgcgaccctctcgac
caatctaaggagatcaagcgcatcagcatgtacctgacgcgactgctctccggcagtgtg
ctggagacggagagcctttgcgtcatcccaggccgccgcgtgtggagcatcgatgcagag
gtgatcattgtgaacaatgatggcaatgcgcaagatgtggcgcagtgggccgtgatgacc
gccctgcagcacgtacgcaggcccgagctcaccattcgtggcgaagacgtgattgtacac
cccccgcatgaacgggacccggtgccgctgccgcttcatcacatccccctctccttcacg
tttgctgtctgcgccaatccgcaggaggtgcagctggcggtgcgcgcggccacgctgcgt
agtgcacatgcacctcgagccggtgcctcctccggcgccaacgcggatgagggcgacggt
gaagcggaagagcttggctggtcgagtgacgcactgcaggtcgtggtggatccgtcgtta
gaggaggctaccgctgccgcgtgcacggtgtcggtggccctgaacggtgagggtcacgtg
tgctcgctggagaaagcagatggctgctatgtgtcaatcgcgtacctggagcaatgcatg
gagattgccacgaagctcacgcaggcgctgctgtcgcagatgaaggagtcgatggaggcg
cacaatgcgaagcgcacggaagcggtgcgcagccagtttctctgggcacagcagcgtcac
ggcatccaggctattgcgaccccgggggacgagggggagcacgcacgcaagagcgccaag
acagagaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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