KEGG   Leishmania major: LMJF_34_3860
Entry
LMJF_34_3860      CDS       T01014                                 
Name
(RefSeq) putative small nuclear ribonucleoprotein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
lma  Leishmania major
Pathway
lma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LMJF_34_3860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lma03019]
    LMJF_34_3860
   03041 Spliceosome [BR:lma03041]
    LMJF_34_3860
   03032 DNA replication proteins [BR:lma03032]
    LMJF_34_3860
Messenger RNA biogenesis [BR:lma03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     LMJF_34_3860
Spliceosome [BR:lma03041]
 Complex A
  U1 snRNP components
   Sm proteins
    LMJF_34_3860
  U2 snRNP components
    LMJF_34_3860
 Complex B
  U1 snRNP components
    LMJF_34_3860
  U4/U6.U5 tri-snRNP components
    LMJF_34_3860
 Complex C
  U2 snRNP components
    LMJF_34_3860
DNA replication proteins [BR:lma03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     LMJF_34_3860
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 5655170
NCBI-ProteinID: XP_001686492
UniProt: Q4Q2F6
Position
34:1642935..1643276
AA seq 113 aa
MAESIPIKVLFDALHLKVSIEVATGEVYHGTVEELQNNMNVLLKDATKTARGGKETKMDS
VFVRGSNIVFFQLPDALQTSPALLRAGEVVSKAKDTRGDGKGFGASRKRARNS
NT seq 342 nt   +upstreamnt  +downstreamnt
atggcggaaagcattccgatcaaggtgctctttgatgcgctgcacctgaaggtttccata
gaagtcgctaccggggaggtctaccatggcaccgtagaagagctgcagaacaacatgaat
gtgctactaaaagatgccaccaagactgcacggggcggtaaggagaccaagatggactcc
gtctttgtgcgaggctcaaacatcgtcttcttccagttgcccgatgcgctgcagaccagt
cctgcgttactccgcgcaggcgaggtcgtgtccaaggcaaaagacacgcgtggcgacggc
aagggatttggcgcgtctcgcaagcgtgctcgcaactcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system