KEGG   Leishmania major: LMJF_36_2830
Entry
LMJF_36_2830      CDS       T01014                                 
Name
(RefSeq) putative dead/h helicase
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
lma  Leishmania major
Pathway
lma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LMJF_36_2830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lma03041]
    LMJF_36_2830
Enzymes [BR:lma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     LMJF_36_2830
Spliceosome [BR:lma03041]
 Complex C
  Other components
   Step II factors
    LMJF_36_2830
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 HA2_N AAA_30 AAA_19 AAA_23 nSTAND3 AAA_7 YWFCY SRP54 AAA_33 AAA_16
Other DBs
NCBI-GeneID: 5655572
NCBI-ProteinID: XP_001686861
UniProt: Q4Q1D7
Position
36:complement(1157860..1161126)
AA seq 1088 aa
MNVVDDTVAAAGGDDDAIAEQQNMSFLMKLQELYCKTVLYEQLEQMMGHPATQEESDGYL
DDVEGLVKLYCSEREAAKKKAPQGDGADAAAQREEVTEQHILHSLSVAINGEAEADEGPD
IPMSSIQRLCHILRDCLTTETVETGLAVGSLLLADDAKRSAEEAARLAYQQQQRHMHGGV
DTASMSTSTAERKNAMKVSPEEMFRLAQHVRSGLADEAELLKLRSEDNEEEGGGAQDVEL
NDEEPRFLRNMGFSSMLHRRINYRAPLPSQQLRDARTPQHRQAILDRLAQRQQGDSSKLN
SMEVVAQMQEKTNMERRIIARKAQRTQQRSREYDFGATMSGRDDRSVLDEDRYGRKGGAL
ESEEYSAPPTLLHSELNALPEEGGFRPQDMPTKLAPWMKHSFGRKLRFGLPETMQTIQEQ
RTSLPIYAKKEALLNFVDAHRVTVLVGETGSGKTTQIPQYLAEHGYADRGMIACTQPRRV
AAETLAMRVAEEYGCRLGEEVGYTVRFRDVTSSLTKVKYMTDGMLLREALLDDSFQRYSV
IILDEAHERSISTDLLFAIVRQALRKNAVLKVMVTSATLETEKFCAYFGASEPFRIEGRT
FPVETYYLTEPTTDYVRVALQTVMMIHLQEPPGDVLVFFTGQEEIELGGEQLFRWMEMLR
RQVSTPLPDLMVLPLTATMPQEVQSKVFEPTPPGCRKVVLATNVAETSITITNLYYVVDS
GFCKQNIFDAKHGIDQLKVMPVSQAQAKQRSGRAGRIGPGKCYRMYTEQQFTTDMVPETV
PDIMRTSLFHVTLQLKAMGLDLLNLELMDCPPKEAIVSALEKLRYLEALDDDGLLTPLGS
RMAQLSIDPSQSKTLLTAVDLGCSEPVLTIVSMLAVQKRGVFYRPRDQQDASDAARRQFM
QPEGDQLTLMAVYDAWVENGMSEDWSKHNFLKHRMLVEARDTRDQLKEMLVRRNQHISHE
NDANLDEVRKSITAGYFFNAARRVDSHTRSYVTLSDRREVYVHPSSVLIDDPPKYVLYDD
LRMTKREYMTELLAIEPKWLVELAPAFYARPKEGRLTKEQAAERFTPILKSWETGSSWRI
SRLKKQRR
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgaacgttgtcgacgacactgtggcggcagcgggcggcgacgacgacgccatcgccgag
cagcagaacatgtctttcctcatgaaactgcaggaactgtactgcaagacggttctttac
gagcagctggagcagatgatgggccaccccgccacccaagaagagagcgacggctacctt
gacgacgtggaagggctcgtcaagctctactgctccgagagggaggcggcgaagaagaag
gcgccgcaaggtgatggggccgatgccgctgcccaacgagaggaggtgacggagcagcac
atcctgcactctctctccgttgctatcaacggcgaggccgaggcagatgagggacccgac
atccccatgtcaagcattcagcggctgtgccacatcctccgcgattgcctcactacggaa
acggtggagacagggctcgctgtcgggtcactgctgctggccgatgatgccaagcgtagc
gctgaggaggcggctcgccttgcctaccagcagcagcagcgtcacatgcacggcggcgtc
gacacggccagcatgagcacctccactgcggagcgcaagaatgccatgaaggtctcgcca
gaggagatgttccgcctcgcccagcacgtccgcagtggtcttgccgatgaagcggagctg
ctcaaattgcgctccgaggacaacgaggaagaaggcggtggcgcgcaggacgtggagctg
aacgacgaagaacctcgcttcttgcgcaacatgggcttctcctcgatgctgcaccgtcgc
ataaactaccgcgcaccgctgccgtcgcagcagctccgtgacgcccgcacgccgcagcac
cgtcaagccatcttggacagactcgcccagcgtcagcagggcgactcgtcaaagctgaac
agcatggaggtggtggcgcagatgcaggagaagacaaatatggagcgccgcatcattgcc
cgcaaggcgcagcgtacccagcagcgatcccgcgagtacgactttggggcgaccatgagc
ggtcgcgatgataggtcggtgcttgacgaggaccgctacgggcggaaaggcggggcgctt
gaaagcgaagagtactcggcaccgcccacccttctgcactcggagctgaacgcgctgccg
gaggagggcggcttccgaccgcaggatatgccgacgaagctggcgccgtggatgaaacac
agctttggacgcaagctgcgctttggcctgcccgagactatgcagacaatacaggagcag
cgcacctccctcccgatttacgcgaagaaggaggctctgctgaacttcgtagatgcacac
cgggtgaccgtacttgtcggagagacaggcagcggcaagacgacgcagattccgcagtac
ctggcggagcacgggtacgccgaccgaggcatgatcgcctgcacgcagccacgccgtgtc
gccgccgagacgcttgccatgcgcgtcgctgaggagtatggttgccgccttggcgaggag
gtcggttacaccgttcgcttccgcgacgtcacctcgtctctgacaaaggtcaagtacatg
acggacggtatgctgctgcgcgaagcgctgctggacgacagcttccaacgctacagcgtc
atcatcctcgacgaggcgcacgagcgctccatcagcaccgatctgctcttcgccatcgtg
cggcaggcgctgcggaagaacgcggtgctgaaggtgatggtgacctctgccaccctcgag
acggagaagttctgcgcctactttggcgcctctgagccttttcggattgagggtcgcacg
ttccctgtggagacctactacctcaccgaacccaccaccgactacgtacgagtcgccctg
cagacggtcatgatgattcacctgcaggagcctccaggggacgtccttgtctttttcact
ggacaggaagagatcgagctgggcggggaacagttgtttcgctggatggagatgctgcgg
cggcaggtaagcacgccgttgcctgacttgatggtgctgcctctcacggccaccatgccg
caggaggtgcagtcgaaggtgttcgagcccaccccacccgggtgccgcaaggtcgtactg
gccacgaacgtcgcagagacgtcgattaccatcaccaacctctactacgtcgttgacagc
ggcttctgcaagcagaacatcttcgatgccaagcacggcatcgatcagctcaaggtgatg
ccggtgtctcaagcgcaggcgaagcagcgctccggtcgtgcggggcgtatcgggcctggc
aaatgctaccgcatgtacacggagcagcagttcacgacggatatggtgccggagacggtg
ccagacattatgcggaccagcctcttccacgttaccctgcagctgaaggccatgggactc
gatctccttaacctcgagctcatggactgccctccgaaggaggccattgtgtcagcgcta
gagaagctgcgctaccttgaagcgctcgacgacgacggactgctgaccccgctagggagc
cgcatggcgcagttgtccatcgacccctcgcagagcaaaacgctgctcactgcggtggac
ttgggctgcagcgagcccgttctcacaattgtgtcgatgctggcagtgcagaagcgtggc
gtcttctaccgccctcgagaccagcaagatgcgtctgacgcggcgcgacgccagttcatg
caaccggagggtgatcagctcacactcatggcggtctatgatgcctgggtggagaacggc
atgtccgaggactggagcaagcacaacttcctgaagcaccgcatgctggtcgaggcgcgc
gacacacgcgaccagctcaaggagatgctggtgcggcgcaaccagcacatatcacacgag
aatgatgcaaacctcgacgaggtacgcaagtccatcacggccgggtacttcttcaacgcg
gcgaggcgtgtcgactcgcacacccgctcgtacgttacactgtccgacaggcgcgaggtg
tacgtgcacccctcctcggtgctcatcgacgacccacctaagtacgttctgtacgacgac
ctccgcatgacgaagcgggagtacatgacggagctgctggcgatcgagccgaagtggttg
gtggagctggcgccagccttttacgcacgaccgaaggaagggcgtctcactaaggaacaa
gcggctgagcgcttcacaccgatcctaaagtcgtgggagacaggcagctcctggcgtatc
tcacgtctcaagaagcagcggcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system