KEGG T00898: Lm4b

Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_00007

Entry

Lm4b_00007        CDS       T00898

Symbol

gyrA

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

lmc Listeria monocytogenes CLIP 80459 (serotype 4b)

Brite

KEGG Orthology (KO) [BR:lmc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmc03032]
    Lm4b_00007 (gyrA)
   03400 DNA repair and recombination proteins [BR:lmc03400]
    Lm4b_00007 (gyrA)
Enzymes [BR:lmc01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Lm4b_00007 (gyrA)
DNA replication proteins [BR:lmc03032]
Prokaryotic type
  DNA Topoisomerases
   Lm4b_00007 (gyrA)
DNA repair and recombination proteins [BR:lmc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Lm4b_00007 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C IKI3

Other DBs

NCBI-ProteinID:

CAS03796

Position

8065..10593

AA seq 842 aa
MAETPNQRITEINLNKEMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYAMNDLGMTS
DKAYKKSARIVGEVIGKYHPHGDTAVYFTMVRMAQDFSYRNMLVDGHGNFGSVDGDMAAA
MRYTEARMSKISMELLRDINKDTIDYADNYDGSEREPVILPARFPNLLVNGSSGIAVGMA
TNIPTHHLGEVIDGVLALSHDPDITIRDLMEYIPGPDFPTAGMIMGRSGIRRAYESGRGS
ITVRGRVDIEEKKNGKETIVITEIPYQVNKARLVERIAELAREKKIDGITSLNDESDRSG
MRIVIEVRRDISASVIVNNLFKMTALQTTFGINMLALVDNHPKVLNLKEILYHYLEHQKV
VIRRRTEFELRKAEARAHILEGLRIALDNIDAIIKLIRGSKTSDVAKEGLMTQFNLSDKQ
AQAILDMRLQRLTGLEREKIEEEYQNLVALINDLKAILADDERILEIIREELEEIKVKYA
DKRRTEILAGDLVSLEDEDLIPEEEVAITLTKRGYIKRLPLSTYRSQRRGGRGIQGMSTH
EDDFVEHLVATSTHDTLLFFTNTGKVYRSKGYEVPEYGRTAKGIPIINLLGIESQEQVNA
VINLSEFTDDSYLFFTTKHGVVKRTTLSQFAKIRQSGLRAVELRENDELISVQMTDGSKN
MIIATKHGQSIYFPEENIRVMGRTAAGVRGIRLREDDEVIGMEVLEDDEKVLVVTEKGYG
KQTPASQYPLRNRGGMGVKTVTITEKNGNLVAMKTVTGEEDLMLMTVSGVLIRFEIDTVS
QTGRSAMGVKLIRLDEDEKVATVAKVPKEEDEVELEEEIDETLITQVPDESFEDAPGSDI
EE

NT seq 2529 nt +upstreamnt +downstreamnt
atggcagaaacaccaaatcaacgaataacagagataaacttaaataaagaaatgcggaca
tcattcctggactatgcgatgagtgtaattgttgcccgtgccctaccagacgttcgtgac
ggattaaaaccagttcatcgtcgtattctatatgcgatgaatgacttaggtatgacttct
gataaggcctataaaaaatcagctcgtatcgttggtgaagtaatcggtaagtatcacccc
cacggcgatacagcggtttattttacaatggttcggatggcgcaagattttagttaccgt
aatatgctagttgatggacatggtaactttggttcggttgatggcgatatggcggcagcg
atgcgttatacagaagcacgtatgtcaaaaatttcgatggaacttcttcgcgatattaat
aaagatacaattgattatgctgataactacgatggttctgaacgtgagccagtcatttta
ccagcgcgtttccctaacttacttgtcaatggttcgtcaggtatcgcagttggtatggca
acaaacattcctacccaccatcttggtgaagttatcgacggcgttttagcgcttagtcat
gatccggatattactattcgtgatttaatggaatatatccctggccctgacttccctact
gctgggatgattatggggcgtagcggaatccgtcgcgcttacgaaagtggccgtggttcg
attactgttcgtggtcgtgtcgatattgaagaaaagaaaaatggtaaagaaacaatcgtt
attaccgaaattccttaccaagtaaataaagcgcgcctagttgagcgtattgccgaacta
gctcgtgagaagaaaatcgacggtatcacttccctaaacgatgaatctgaccgttctgga
atgcgcattgttattgaagttcgtcgtgatattagtgcaagtgttatcgtgaataattta
ttcaaaatgacagcacttcaaactacttttggtattaatatgctcgcacttgtcgacaat
catccaaaagtacttaatttaaaagaaattctttatcattatttagagcatcaaaaagta
gttattcgtcgccgtacggaatttgagcttcgtaaagcagaagcgcgcgctcacatttta
gaaggtttacgaattgcactagataatattgacgcgattattaaattaattcgtggatca
aaaacttccgatgttgctaaagaaggcttgatgacacaattcaacctttcggacaaacaa
gcgcaagccattttagacatgcgtttgcaacgtttaacaggtttggaacgcgaaaaaatt
gaagaagaataccaaaacttagtggcattaattaatgatttaaaagccattttagctgat
gatgagcgtattcttgaaattattcgtgaagaattagaagaaatcaaagttaaatacgcg
gataaacgtcgtacagaaatcttggctggtgatttagtaagccttgaagatgaagactta
atccctgaagaagaagtggcgattacactaactaaacgtggctatattaaacgtttacca
ttatcaacttatcgtagccaacgtcgtggtggtcgtggtatccaaggtatgtctactcat
gaagatgatttcgtagaacatcttgttgcaacgagcacgcatgatacgttactattcttc
actaacacaggtaaagtttaccgttcgaaaggttatgaagtacctgaatacggtcgtacc
gccaaaggtatcccaatcatcaacttacttggaatcgaaagccaagaacaagtgaatgcc
gtgataaatctatccgaattcactgatgatagctacctattctttactactaaacacggt
gtcgtgaagcgtacaaccctttctcaatttgcgaaaattcgtcaaagtggtcttcgtgca
gttgaacttcgcgaaaacgatgaactaatctctgttcagatgacagatggtagcaaaaac
atgattatcgcaacgaaacatggacaatctatctacttcccagaagaaaatattcgcgta
atgggccgtacagctgctggtgttcgtggtattagacttcgtgaagacgatgaagttatc
ggtatggaagtccttgaggatgatgaaaaagttctcgttgtaacggaaaaaggatacggt
aaacaaacaccggcttcccagtacccgcttcgtaatcgcggtggtatgggtgttaaaacc
gttacaatcacagagaaaaatggtaacttagtcgcaatgaaaacagtgactggtgaagaa
gacttaatgctaatgacagtaagtggcgtattaattcgtttcgaaattgatacagtatca
caaacaggtcgtagcgcaatgggtgtcaaactaattcgtcttgatgaagatgaaaaagta
gctactgttgcaaaagtgccaaaagaagaagatgaagttgagcttgaggaagaaatcgat
gaaacattaatcacacaagttcctgatgaaagttttgaagatgctcctggaagcgatata
gaagaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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