KEGG   Leisingera methylohalidivorans: METH_05860
Entry
METH_05860        CDS       T02961                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
lmd  Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:lmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lmd03009]
    METH_05860
Enzymes [BR:lmd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     METH_05860
Ribosome biogenesis [BR:lmd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    METH_05860
SSDB
Motif
Pfam: S4 PseudoU_synth_2
Other DBs
NCBI-ProteinID: AHD00316
UniProt: V9VNS6
Position
complement(1141344..1142462)
AA seq 372 aa
MSNTPASPKGKPAPKAAAGKAPAANPTDGKAPEGDRIAKVLSRAGVASRREAERMISEGR
VTVNGDKIASPALNVTAADRISVDGKPLPEAEAPRMWLYYKPIGLVTSNSDEKGRTTIFD
ELPEDMPRVMTVGRLDINSEGLLLLTNDGAIKRKLELPSTGWLRRYRVRINGRPRDEDFA
PLRKGAVIDGEKFQPMTVSLDRQQGANAWLTVGLREGKNREIRRAMEYVGFNVNRLLRVS
YGPFQLGELKPGEVEELRSRVVRDQLGLEPEEEKPAARPTRGRGKPGGKPGGKPMGKTGG
PGGKPTGKPGGRPGGGFGGKPGDKSTRSGGGKPGPKGPGSRGSTGDRGASQGGGRPAQRG
GGKPSGGKNPRR
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgagcaatacacccgcatcccccaagggcaaaccggccccgaaagccgcggcaggcaaa
gcgcccgccgcaaatccgactgacggcaaggcgcccgaaggcgaccgcatcgccaaggtc
ctgtcgcgcgccggcgtcgcctcgcgccgggaggctgaacggatgatttccgagggccgt
gtgacggtgaatggcgacaagatcgccagcccggcgctgaacgtgaccgccgccgaccgg
atcagcgtcgatggcaagcccctgcccgaggccgaggcgccgaggatgtggctgtattac
aagcctatcgggctggtcacctcgaacagcgacgaaaaaggccgcacaacgatctttgac
gagctgcccgaagacatgccccgggtgatgacggtgggacggcttgacatcaattccgag
ggcctgttgctgctgaccaatgacggcgccatcaagcgcaagctcgaactgccctcgacc
ggctggctgcgccgctaccgcgtgcgcatcaacggccgcccgcgggacgaggattttgcg
ccgctgcgcaagggcgcggtgatcgacggcgagaaattccagccgatgacggtgtcgctg
gaccgccagcagggcgccaatgcctggctgacggtggggctgcgcgagggcaagaaccgc
gagatccgccgcgcgatggagtatgtcgggtttaacgtgaaccggctgctgcgggtgtcc
tatggcccgttccagctgggcgagctgaagcccggcgaggtggaggagctgcgctcgcgg
gtggtgcgcgaccagctggggctggagccggaggaggaaaaacctgccgcccgcccgacc
cgcgggcgcggcaagccgggtggcaaaccgggtggtaagcccatgggaaaaaccggtggc
cctggcggcaagccaactggcaagcccggcggcaggccgggcggcggttttggcggcaag
cccggtgataaatcaacccgttctgggggcggaaaacccggcccgaaagggcctgggagc
cgcggcagtaccggtgaccggggcgcatcccagggtggaggccggcccgcacaacgcggc
ggcggcaagccctctggcggaaagaatccccggcgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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