KEGG   Listeria monocytogenes F2365 (serotype 4b): LMOf2365_1587
Entry
LMOf2365_1587     CDS       T00174                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lmf  Listeria monocytogenes F2365 (serotype 4b)
Pathway
lmf03030  DNA replication
lmf03410  Base excision repair
lmf03420  Nucleotide excision repair
lmf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMOf2365_1587 (polA)
   03410 Base excision repair
    LMOf2365_1587 (polA)
   03420 Nucleotide excision repair
    LMOf2365_1587 (polA)
   03440 Homologous recombination
    LMOf2365_1587 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmf03032]
    LMOf2365_1587 (polA)
   03400 DNA repair and recombination proteins [BR:lmf03400]
    LMOf2365_1587 (polA)
Enzymes [BR:lmf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMOf2365_1587 (polA)
DNA replication proteins [BR:lmf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LMOf2365_1587 (polA)
DNA repair and recombination proteins [BR:lmf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LMOf2365_1587 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LMOf2365_1587 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 Enkurin LTD HHH_2 XPG_I FeoB_N
Other DBs
NCBI-ProteinID: AAT04362
Position
complement(1581528..1584155)
AA seq 875 aa
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPEQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELS
FEIVTELKEKHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKW
VESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFTSVAIRHDYTE
VETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQLALMEDLELPL
TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq 2628 nt   +upstreamnt  +downstreamnt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgccttttatgcttta
ccgcttttaaataatgataaaggtgtttacacaaatgcggtgtatggtttcgcaatgatg
ttgatgaatgtactcgaaaaagaaaaacctagccatgtgctcgttgcatttgatgctgga
aaaacaactttcaggcatacaacatttaaaggttataaaggcggacgtcaaaaaacccca
agtgagttatctgaacagtttccattcatccgagaacttttaacggcgtatgatatcccg
caatatgaacttgccaattacgaggcagatgatattatcggaacattgacgaaaaaagca
gaagcagatggaatggaagtagcaatcattaccggagaccgcgacttaacgcaattagct
tctgaaaaaacaacggtttatattactaaaaaaggcatagccgatatggaaaccaacaca
ccagaaacactaaaagaaaaatacaatctgactcctgaacaaatcattgatatgaaaggc
ttaatgggtgattcctccgataatattcctggtattccaggcgttggtgaaaaaactgcc
ttaaaactcttacatgaatttggtggaacggtggaaagtgtgttagagcatgccgaggaa
atttccggtaaaaaactaaaagaaaaagtactggaaaataaagaattagctattttaagt
aaagagttagctacaatcaatgtggattcaccgattgaatgcacggtcgaaagcacgaaa
tacgacggctatcaaacagaaaaagttatccctttattaaaagaaatgaattttacaaca
cttttgaaaaatatcgagggagatacaccagaagaaacgaaagaactaaaagagttgtct
tttgaaatcgtaacagaattaaaagaaaaacattttggtgggaaaaccgcgctttatgtg
gagctagaaaacgataattaccatacagctaatttcattggattaacagtacattctagc
caagggacgtatttctttacaaaagaaacagccgaaagtagtgaggtattccgcaaatgg
gtagaaagtgatcaaacaaaagtagtgtacgatgcgaagaaaacaatggttgcaatgaac
cgcattggtttggccatttctggtatcacctttgatatcatgttagcatcttacttgcta
aatccatctgattcgattgatgactttacaagtgttgcaatacgacatgattacacagaa
gtagaaacagatgaagcagtctacggaaaaggtgctaaacgtagcactcctgaagaaagc
attgttgcggcacacttagctagaaaagcagtggctattgctgacttagagaaaagacta
gttgatgatttagaagaaaatgaacaactagctttgatggaagaccttgagctacctcta
acttttgtattagcagaaatggaaatgcaaggggttagtgtagatacagaacgtctagag
aatatgaaagtggagctagcgggtagactgaaaacattggaagagtcgatccattctcta
gccggcgaagaattcaatattaattcaccgaaacaactaggtgtgattttatttgaaaag
cttggtctcccagctgtcaagaaaacaaaaacaggttattcaacggctgccgatgtactg
gaaagtttatctggtaaacacgcgattattgatgaaattttgttatatcgtcaacttggt
aaaattcagtccacttatatcgaagggctgcttaaagtgacagataaagaaacacataaa
gtacacacacgtttcaaccaaacattaacgcaaacaggacgcttaagttcagttgatccg
aacttgcaaaatatccctattcgtttagaagaaggacggaaaattagacaagttttcgta
ccgagtaaaccaggttggaaaatgttttcagccgattattctcaagtagagctgagagtc
ttagcacatatttcggaagatgaaaatttaatttatgcatttaagcacgattatgatatt
catacgaaaacggcgatggacgtgtttcatgttgagcaagacgaagtggattcattaatg
cgtcgtcaggctaaagcggtaaactttggtattgtatatggaattagtgattatgggctt
tcgcaaaatcttggtattacgcgtaaagaagcaaaagactttattgatcgttattttgtg
agctatccagccgtgaaagaatatatgcaagacatcgttcgttttgcgaaagaaaaaggc
tatgtagagaccattttacatcgtcgtcggtatattccagagattgtcagtcgtaatttt
aatgttcgcggatttgcagaaagaacggcgatgaacacgcctattcaaggtagtgccgct
gatattatcaaaaaagcgatgattctgatgagcgagcgtttagtatctgaaaaattagaa
gcaaaattattactacaagtacacgatgaattaatcttcgaggcgcctgaagctgaaatc
gctaaattagaagaaattgtcccagatgttatggaaaatgcagtagagctttctgtaccg
ctaaaagtagatagcgcatttggtgacacttggtacgacgcgaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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