KEGG   Listeria monocytogenes HCC23 (serotype 4a): LMHCC_1277
Entry
LMHCC_1277        CDS       T00801                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lmh  Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh02024  Quorum sensing
lmh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMHCC_1277 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMHCC_1277 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmh03019]
    LMHCC_1277 (hfq)
   03036 Chromosome and associated proteins [BR:lmh03036]
    LMHCC_1277 (hfq)
Messenger RNA biogenesis [BR:lmh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LMHCC_1277 (hfq)
Chromosome and associated proteins [BR:lmh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LMHCC_1277 (hfq)
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: ACK39623
Position
complement(1316469..1316702)
AA seq 77 aa
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHA
ISTFSPQKNVALNPDAE
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaacaaggtggacaagggttacaggactattacttaaatcaattgcgtaaggagaaa
attcttgcaactgtatttttaacaaacggctttcagttaagaggacgcgttgtaagtttt
gacaattttaccgtactactagatgtcgaaggaaaacaacaacttgtatttaaacacgca
atttcaactttctccccgcagaagaacgtcgctttaaatcctgatgcggaataa

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