KEGG   Leishmania mexicana: LMXM_27_1130
Entry
LMXM_27_1130      CDS       T02288                                 
Name
(RefSeq) putative intraflagellar transport protein IFT88
  KO
K16474  intraflagellar transport protein 88
Organism
lmi  Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lmi03037]
    LMXM_27_1130
Cilium and associated proteins [BR:lmi03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   LMXM_27_1130
SSDB
Motif
Pfam: TPR_16 TPR_1 TPR_2 TPR_19 TPR_12 TPR_6 TPR_8 TPR_7 TPR_14 TPR_11 TPR_17 ANAPC3 TPR_9 TPR-S TPR_10 Sel1
Other DBs
NCBI-GeneID: 13449616
NCBI-ProteinID: XP_003876688
UniProt: E9AZ16
Position
27:complement(458802..461237)
AA seq 811 aa
MNGNDEDIYAAFQTPDIVSNPWTTNTNPFEAPAQEAMAGNPLMQAPPSQWGRAGMGSAWG
LPGSRMGTRGCGILGAARPMTSNRAVGFNSASTGAAAALFDPTGQACMANMAMGPAPPLK
KRSENSQEEELAEMEKQVNRLIEESAMLALQKDYGAALEKAKDAGKLERSLCKKREQYGL
AEQINVDLTYAVHFNLAVQYQNHQLYTEALNTYNLIIRNVQFPQAGRLRVNMGNIYLAQQ
NYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSYETVVEGNGDANA
TFNLILCYYALGETEKMKRTFTRLMNCRLAGLDDEEDFEEEEKRKDVLVDDSLSRMCKER
RARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASELEMCKNLNYLK
HKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLSLVANQYNAKAL
VNKGNFSFVKKDYEKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQAL
VDSSEVLYQIADLSDLVGDPSALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYY
LEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGD
YAQAKLLYEQVHRKYPDNIECLNYLVQLCKDAGLNEEANEWFKATKKVERQQFHSSSSSV
GGESGDDDLESSVEGGNNINGHHRRRTSGTAAPDTAVAGRRAGGGAVADKDFSVGLSDDD
IVDGKAKQNGAKRLKKAKSSDSDDEIDLPGI
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgaacggcaacgacgaggatatctacgcggcgttccagacgccggatattgtgtcgaac
ccatggacgacgaacacgaaccccttcgaggcccctgcgcaggaggctatggctggcaac
cccctcatgcaggcccctccttcgcaatgggggcgcgctggcatgggctccgcctggggt
ttgccgggcagccgcatgggtacaaggggctgtggtatcctcggcgccgcgcgtcccatg
acgtctaaccgcgccgtcggcttcaacagcgcaagcaccggcgccgctgccgccctcttc
gatcccactggccaggcgtgcatggcgaacatggcgatgggcccggccccgccactgaag
aagcggagcgagaacagtcaggaggaggagctggccgagatggagaagcaggtgaacagg
ctgatcgaggagagcgccatgcttgctctgcagaaggactacggcgcggcactcgagaag
gccaaggatgccggaaagttggagcggtcactctgtaaaaagcgcgagcagtacgggctc
gccgagcagatcaacgtcgaccttacttacgcagtgcacttcaacttggcggtccagtac
caaaaccaccagctgtacactgaggccctcaacacgtacaacctcatcattcgaaacgtg
cagtttccgcaagccggccgcctgcgggtaaacatgggcaacatctatcttgcgcagcag
aactacctcctagccattaagatgtaccgcaaggtgctcgacgagacgccgaccgccggc
aaggagctccgctaccacctctgccgcaatatcgccaacgcgtttgtgaagctgggccag
tacagggacgccgcgaacagctacgagaccgtggtggagggcaacggggatgccaacgcc
acgtttaacctcattttgtgctactacgcgctgggcgagacggagaagatgaaacggacc
ttcacgcgcctcatgaactgccgcctcgcgggcctcgacgacgaggaggactttgaggag
gaggagaagcggaaagacgtcttggtagacgacagcctgagccgcatgtgcaaggagcgc
cgcgccagatacctcaagtacatcatcacagcagcccgcttgattgcgccagtgctgcac
aaggactggtgtgtcggctacgactacatcatctctcagctgcgtacctacgagatgcgc
gacccgacctcgcacgtggcgagcgagctggagatgtgcaaaaacctgaactacctcaag
cacaagcgctatcaggaggcgatcaacggcctgaaggagttcgagaagaaggacaggagc
ctgcgagcacgggcagccacgaacctggcatacctctacttcctcgagggcgactacgag
aacggggagcagtacagcgacctgagtctcgtcgcgaatcagtacaacgccaaggcgctg
gtaaacaagggcaacttctccttcgtcaagaaggactacgagaaggcgaaggagctgtac
aataaggcgctggcggtggaggccgacaacgtggaggccatctataaccttggcttggcc
gccaagaagctagggctgtacgaggaggcggtgcgcatgttcaagcgcgtgcaggcgctc
gtggacagtagcgaggtgctgtatcagattgccgacctcagcgaccttgtcggcgacccg
tcggcgctggagtggtttaaccgtctcattggccgcgttccgacggacccgaacgcgctg
gcccgcatcggctccctctacgcccgcgacggcgacgatgtgcaggcgtttcactactac
ctggaggcctaccgctactaccaggtaaacatggacgtcatctcctggctcggcgcatac
ttcgtgaagaacgaagtctacgataaggcggtgcagttcttcgagcgcgcttcgcacatc
caaccgcaggaggtgaagtggcagctgatggtggcctcgtgccaccgccgccgcggcgac
tacgcgcaggcgaagcttctctacgagcaggtacaccgcaagtatcctgacaacatcgag
tgtctcaattacttggtgcagctatgcaaggacgctggcctcaatgaggaggccaacgag
tggttcaaggcaacgaaaaaggtggaacggcagcagttccacagcagcagcagcagcgtc
ggcggcgagagcggcgacgacgacttagaatcctccgtcgagggcgggaacaacatcaac
ggtcaccatcgcagacgcacaagcggtacggctgcacccgacacggcagtcgcaggccgc
cgcgcaggtggtggtgctgtggctgacaaagacttttctgtcggcctctccgacgacgac
atcgttgacggcaaagcaaagcagaatggcgccaagaggctgaagaaggcgaagagcagc
gactcagatgatgaaatcgacctgcctggcatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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