KEGG   Leishmania mexicana: LMXM_31_3920
Entry
LMXM_31_3920      CDS       T02288                                 
Name
(RefSeq) putative DNA repair helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
lmi  Leishmania mexicana
Pathway
lmi03022  Basal transcription factors
lmi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LMXM_31_3920
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMXM_31_3920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmi03021]
    LMXM_31_3920
   03400 DNA repair and recombination proteins [BR:lmi03400]
    LMXM_31_3920
Enzymes [BR:lmi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMXM_31_3920
Transcription machinery [BR:lmi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LMXM_31_3920
DNA repair and recombination proteins [BR:lmi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LMXM_31_3920
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD
Other DBs
NCBI-GeneID: 13453420
NCBI-ProteinID: XP_003878238
UniProt: E9B3H0
Position
31:1483134..1485554
AA seq 806 aa
MTHSLSGDARTDEKCLFVESRIESGGYITIIAESFRRSYVIIRPLLTTLAEAISRPSLMH
EYRLTPFSLGAAVSNGIDAAEATAFLETYAYGLAESSERRKLVRQFIESCMTCYNLARII
IDSDRTLVQCKNEETAQMLLRDAVIASVAATPLRIFYEESSWDENPAPYPSFLLQSRVMS
KVVAAQCVVLGLPIQQQYDFEKDTSVRTAHISLRTQTKPRRYQIEAVDAAIHDGTLNSGC
LLLPCGAGKTLLGIMLMCKVKKPTLVVCAGGVSVEQWKSQILDYAVLEAPPPTDDGDAAD
AHGGRPHQIKNGAARIACLTGKQKDPITEETDVVLTTYSMLVTAHKAKMRQQATAISSED
GLFTGRGLRKRKENPKEKLFAPYGLLILDEVHVMPAESFRESLGFVDAKGVVGLTATYVR
EDHKILDLFHLVGPKLYDISMETLASQGYLSKVHCVEVRTPMTKEFGLEYMDRSSKAARA
GKAPALVMLAAANPNKMMCVRELVWQHLDAGAKILLCCDHIMLLKEYGELLNAPVICGST
QHKERLMIFSDFQSTSKINVICVSRVGDVSVNLPNANVVIQVSSHGGSRRQEAQRLGRIL
RPKERAANGRTVDAWFYSIISMDTVEMNYAAHRTAFLVDQGYACRVMEYNPFASSVNTAL
GGVKEQVKKHRVGDVVSIKQESLYETLHQSSVLRPRSGERSGCGADAGDCRTESLSYQLE
LLSKVVSSWEIEFQQECRKRRRTAVRDADDNAADETGSADDVVEARPIRTYAAIKSEWRG
GADSANRVTALRDLVGVDDGFVYHEL
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgacgcattcactcagcggagatgctcgcacggacgaaaaatgcctcttcgttgagagc
agaatagaatcgggcggctacatcaccatcatcgcggagtcattccgcagaagctacgtg
atcatccgccctctcttgacgacactagcggaggccatctcgcggccctcgctgatgcat
gagtaccgtctgaccccgttctctctcggcgccgccgtgtcaaacgggatcgacgctgct
gaggcgaccgccttcttggagacctacgcttacggacttgcagagagcagtgaaagacgg
aaacttgtgcgccagttcattgaatcctgcatgacgtgctacaaccttgcccgcatcatt
atcgattcggataggaccctcgtgcagtgcaagaacgaggagacggctcagatgctgcta
cgcgacgccgtgatcgcgtcggtggccgcaacgccgcttcgcatattttacgaggagagc
tcttgggacgagaacccagcgccttacccttcgtttctgctgcagagcagggtgatgtca
aaggtggtggccgcccaatgcgtggtgctcggcctccctattcagcagcagtacgacttc
gagaaagacacatcagttcgcacggcgcacatctcgctgcgcacgcagacaaagccgcgc
cgatatcagattgaggcggtggatgccgccatccacgacggtaccctcaacagcggatgc
ctcctactcccctgcggtgctggaaagacgctactgggcatcatgctcatgtgcaaggtg
aagaagccgacgctggtcgtgtgcgccggcggtgtcagtgttgagcagtggaagagccaa
attctcgactatgccgtattggaagcaccaccgccgacggatgacggcgatgccgcagac
gctcatggcggtcgtccccaccaaatcaaaaacggcgctgcccgcatcgcgtgcctgacg
ggcaagcagaaggatcccatcaccgaggaaacggacgttgtgctgacaacgtacagcatg
ctggtcacggcccacaaggccaaaatgcgccaacaagcaacagcaatatccagcgaggac
ggcctgttcacgggacgtggtctacgcaagcggaaagagaaccccaaagagaagctcttc
gctccgtatggcctgctgattctggatgaggtacacgtgatgccagcggagagctttcgt
gagagtctcggcttcgttgacgccaaaggcgtcgtcggcctcaccgccacctacgtgcgc
gaagatcacaagatcctcgacctcttccacctcgtcgggccgaagctgtacgacatttct
atggagacccttgcctcacaggggtacctctccaaggttcactgcgtcgaggtgcgcaca
ccgatgacgaaggagtttgggctcgagtacatggaccgcagcagcaaagcggcacgggcg
gggaaggcgccggcgctggtgatgctggctgcggcgaacccgaacaaaatgatgtgcgta
cgggaacttgtgtggcaacatctcgacgccggcgccaaaatccttctctgctgcgaccac
atcatgctcctgaaggagtatggggaactgctgaacgcaccggtgatatgcggcagtacg
cagcacaaggagcgactgatgatcttctccgacttccagagcacttcgaagattaacgtg
atatgcgtctcgcgcgttggcgacgtgagcgtgaatctgcccaacgcaaatgtcgtgatt
caggtgtccagccacggcggcagccgccgtcaggaagcccagcgactaggccgtatcctg
cggccaaaggagcgcgccgcgaacgggaggacggtggatgcgtggttctactcgatcatc
agcatggacaccgtcgaaatgaactacgcggctcaccgcaccgccttcctcgttgaccaa
gggtacgcgtgccgcgtcatggagtacaaccctttcgcatcatcggtcaacaccgcttta
ggaggcgtgaaggagcaggtgaagaagcatcgggttggcgacgtagtgagcatcaagcag
gagtctttatacgagacgctgcaccagtcaagcgtgttgcggccgcgatcgggcgaacgc
tccgggtgcggtgccgacgctggcgactgtcgcaccgagtcgctctcgtatcagctcgag
ctgctttcaaaggtggtctccagctgggaaatcgaatttcagcaggagtgtcgcaagcgc
cgccgcaccgccgtgagggacgccgacgacaacgccgctgacgagacgggcagcgctgac
gacgtggtggaggctcgaccgattcgcacctatgccgctatcaaaagtgagtggaggggt
ggtgctgactccgcgaaccgtgtcacagcgctacgcgacctcgttggtgtcgatgatgga
tttgtgtaccacgaactctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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